Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF556Q9HAH1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF556Q9HAH1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZNF556Q9HAH1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF556Q9HAH1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF556Q9HAH1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ZNF556Q9HAH1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF556Q9HAH1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 AC006455.2-201ENST00000429931 906 ntBASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF556Q9HAH1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.39■□□□□ 0.7
ZNF556Q9HAH1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF556Q9HAH1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF556Q9HAH1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF556Q9HAH1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
ZNF556Q9HAH1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 OR2I1P-207ENST00000453522 948 ntBASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF556Q9HAH1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF556Q9HAH1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 AC003102.1-202ENST00000563394 1796 ntBASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 AC099791.2-201ENST00000605725 427 ntBASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ZNF556Q9HAH1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 AP004607.7-201ENST00000527152 1677 ntBASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ZNF556Q9HAH1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms