Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 AL035685.1-201ENST00000636663 812 ntBASIC19.92■□□□□ 0.78
NANOGQ9H9S0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NANOGQ9H9S0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NANOGQ9H9S0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NANOGQ9H9S0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.91■□□□□ 0.78
NANOGQ9H9S0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NANOGQ9H9S0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NANOGQ9H9S0 AP005435.1-201ENST00000529293 1178 ntBASIC19.91■□□□□ 0.78
NANOGQ9H9S0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NANOGQ9H9S0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NANOGQ9H9S0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NANOGQ9H9S0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NANOGQ9H9S0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.9■□□□□ 0.78
NANOGQ9H9S0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 AL512631.2-201ENST00000604634 923 ntBASIC19.9■□□□□ 0.78
NANOGQ9H9S0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NANOGQ9H9S0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NANOGQ9H9S0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NANOGQ9H9S0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.89■□□□□ 0.77
NANOGQ9H9S0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NANOGQ9H9S0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.89■□□□□ 0.77
NANOGQ9H9S0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NANOGQ9H9S0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NANOGQ9H9S0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NANOGQ9H9S0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NANOGQ9H9S0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NANOGQ9H9S0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NANOGQ9H9S0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NANOGQ9H9S0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NANOGQ9H9S0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NANOGQ9H9S0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NANOGQ9H9S0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NANOGQ9H9S0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
NANOGQ9H9S0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.88■□□□□ 0.77
NANOGQ9H9S0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NANOGQ9H9S0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.88■□□□□ 0.77
NANOGQ9H9S0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NANOGQ9H9S0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.88■□□□□ 0.77
NANOGQ9H9S0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.88■□□□□ 0.77
NANOGQ9H9S0 AL138724.1-201ENST00000606771 1088 ntBASIC19.88■□□□□ 0.77
NANOGQ9H9S0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.88■□□□□ 0.77
NANOGQ9H9S0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
NANOGQ9H9S0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NANOGQ9H9S0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NANOGQ9H9S0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.87■□□□□ 0.77
NANOGQ9H9S0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NANOGQ9H9S0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NANOGQ9H9S0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NANOGQ9H9S0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NANOGQ9H9S0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.87■□□□□ 0.77
NANOGQ9H9S0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NANOGQ9H9S0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NANOGQ9H9S0 SERBP1P1-201ENST00000396021 1160 ntBASIC19.87■□□□□ 0.77
NANOGQ9H9S0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NANOGQ9H9S0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NANOGQ9H9S0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
NANOGQ9H9S0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NANOGQ9H9S0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NANOGQ9H9S0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NANOGQ9H9S0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NANOGQ9H9S0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms