Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC069152.1-201ENST00000438030 544 ntBASIC21.89■■□□□ 1.09
EBF3Q9H4W6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 SLC25A24-204ENST00000569674 2357 ntBASIC21.89■■□□□ 1.09
EBF3Q9H4W6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 AC068338.2-201ENST00000563278 1430 ntBASIC21.89■■□□□ 1.09
EBF3Q9H4W6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EBF3Q9H4W6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
EBF3Q9H4W6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.88■■□□□ 1.09
EBF3Q9H4W6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EBF3Q9H4W6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EBF3Q9H4W6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EBF3Q9H4W6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
EBF3Q9H4W6 AC098934.4-201ENST00000564127 592 ntBASIC21.88■■□□□ 1.09
EBF3Q9H4W6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.88■■□□□ 1.09
EBF3Q9H4W6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
EBF3Q9H4W6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
EBF3Q9H4W6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
EBF3Q9H4W6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EBF3Q9H4W6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
EBF3Q9H4W6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
EBF3Q9H4W6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.87■■□□□ 1.09
EBF3Q9H4W6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.87■■□□□ 1.09
EBF3Q9H4W6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EBF3Q9H4W6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
EBF3Q9H4W6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.87■■□□□ 1.09
EBF3Q9H4W6 CYP2T1P-201ENST00000432607 1285 ntBASIC21.87■■□□□ 1.09
EBF3Q9H4W6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.87■■□□□ 1.09
EBF3Q9H4W6 AC133041.1-202ENST00000642053 222 ntBASIC21.87■■□□□ 1.09
EBF3Q9H4W6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
EBF3Q9H4W6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EBF3Q9H4W6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.87■■□□□ 1.09
EBF3Q9H4W6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.86■■□□□ 1.09
EBF3Q9H4W6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
EBF3Q9H4W6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EBF3Q9H4W6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
EBF3Q9H4W6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EBF3Q9H4W6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.86■■□□□ 1.09
EBF3Q9H4W6 AC139530.1-201ENST00000575312 1977 ntBASIC21.86■■□□□ 1.09
EBF3Q9H4W6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.86■■□□□ 1.09
EBF3Q9H4W6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.86■■□□□ 1.09
EBF3Q9H4W6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EBF3Q9H4W6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 MIR4651-201ENST00000582622 73 ntBASIC21.85■■□□□ 1.09
EBF3Q9H4W6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
EBF3Q9H4W6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 AC127496.7-201ENST00000625110 1798 ntBASIC21.84■■□□□ 1.09
EBF3Q9H4W6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 AC008175.2-201ENST00000612840 297 ntBASIC21.84■■□□□ 1.09
EBF3Q9H4W6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.84■■□□□ 1.09
EBF3Q9H4W6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.83■■□□□ 1.09
EBF3Q9H4W6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EBF3Q9H4W6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms