Protein–RNA interactions for Protein: Q9H2X6

HIPK2, Homeodomain-interacting protein kinase 2, humanhuman

Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2Q9H2X6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HIPK2Q9H2X6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.14■□□□□ 0.34
HIPK2Q9H2X6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HIPK2Q9H2X6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 FEM1AP1-201ENST00000431297 1995 ntBASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 MIR6724-1-201ENST00000616420 92 ntBASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 MIR6724-2-201ENST00000616483 92 ntBASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 MIR6724-4-201ENST00000617390 92 ntBASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 MIR6724-3-201ENST00000622482 92 ntBASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 AF106564.1-201ENST00000607058 2553 ntBASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK2Q9H2X6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 HCG11-201ENST00000411553 5696 ntBASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 AC131281.2-201ENST00000520478 145 ntBASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 pRNA.6-201ENST00000610482 90 ntBASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 pRNA.5-201ENST00000612139 90 ntBASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 pRNA.11-201ENST00000618423 90 ntBASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 pRNA.13-201ENST00000619112 90 ntBASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.12■□□□□ 0.33
HIPK2Q9H2X6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 OXCT2P1-201ENST00000447263 1535 ntBASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.11■□□□□ 0.33
HIPK2Q9H2X6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK2Q9H2X6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK2Q9H2X6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.1■□□□□ 0.33
HIPK2Q9H2X6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK2Q9H2X6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.1■□□□□ 0.33
HIPK2Q9H2X6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.1■□□□□ 0.33
HIPK2Q9H2X6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK2Q9H2X6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms