Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS11Q9H270 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VPS11Q9H270 AP005435.1-201ENST00000529293 1178 ntBASIC21.09■□□□□ 0.97
VPS11Q9H270 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS11Q9H270 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS11Q9H270 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS11Q9H270 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS11Q9H270 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.08■□□□□ 0.97
VPS11Q9H270 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
VPS11Q9H270 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
VPS11Q9H270 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
VPS11Q9H270 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VPS11Q9H270 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
VPS11Q9H270 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
VPS11Q9H270 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VPS11Q9H270 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
VPS11Q9H270 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
VPS11Q9H270 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VPS11Q9H270 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
VPS11Q9H270 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VPS11Q9H270 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.08■□□□□ 0.97
VPS11Q9H270 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VPS11Q9H270 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
VPS11Q9H270 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
VPS11Q9H270 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
VPS11Q9H270 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VPS11Q9H270 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
VPS11Q9H270 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
VPS11Q9H270 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.08■□□□□ 0.96
VPS11Q9H270 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.08■□□□□ 0.96
VPS11Q9H270 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.07■□□□□ 0.96
VPS11Q9H270 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VPS11Q9H270 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
VPS11Q9H270 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS11Q9H270 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.07■□□□□ 0.96
VPS11Q9H270 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS11Q9H270 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS11Q9H270 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VPS11Q9H270 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VPS11Q9H270 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.07■□□□□ 0.96
VPS11Q9H270 AC011298.3-201ENST00000615796 283 ntBASIC21.07■□□□□ 0.96
VPS11Q9H270 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS11Q9H270 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS11Q9H270 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS11Q9H270 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS11Q9H270 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.06■□□□□ 0.96
VPS11Q9H270 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
VPS11Q9H270 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS11Q9H270 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS11Q9H270 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VPS11Q9H270 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS11Q9H270 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
VPS11Q9H270 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.06■□□□□ 0.96
VPS11Q9H270 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.06■□□□□ 0.96
VPS11Q9H270 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
VPS11Q9H270 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.06■□□□□ 0.96
VPS11Q9H270 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VPS11Q9H270 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
VPS11Q9H270 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.06■□□□□ 0.96
VPS11Q9H270 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS11Q9H270 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS11Q9H270 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
VPS11Q9H270 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS11Q9H270 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS11Q9H270 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS11Q9H270 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS11Q9H270 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS11Q9H270 GABARAPL3-202ENST00000624044 1851 ntBASIC21.05■□□□□ 0.96
VPS11Q9H270 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS11Q9H270 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS11Q9H270 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS11Q9H270 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
VPS11Q9H270 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS11Q9H270 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
VPS11Q9H270 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
VPS11Q9H270 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS11Q9H270 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.05■□□□□ 0.96
VPS11Q9H270 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS11Q9H270 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
VPS11Q9H270 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
VPS11Q9H270 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS11Q9H270 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS11Q9H270 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS11Q9H270 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS11Q9H270 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
VPS11Q9H270 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VPS11Q9H270 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
VPS11Q9H270 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
VPS11Q9H270 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS11Q9H270 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.04■□□□□ 0.96
VPS11Q9H270 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
VPS11Q9H270 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS11Q9H270 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
VPS11Q9H270 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.04■□□□□ 0.96
VPS11Q9H270 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.04■□□□□ 0.96
VPS11Q9H270 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VPS11Q9H270 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VPS11Q9H270 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS11Q9H270 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS11Q9H270 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms