Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.56■■□□□ 1.68
VPS33BQ9H267 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS33BQ9H267 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.56■■□□□ 1.68
VPS33BQ9H267 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC25.56■■□□□ 1.68
VPS33BQ9H267 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS33BQ9H267 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.56■■□□□ 1.68
VPS33BQ9H267 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.56■■□□□ 1.68
VPS33BQ9H267 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS33BQ9H267 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS33BQ9H267 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
VPS33BQ9H267 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS33BQ9H267 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
VPS33BQ9H267 AC139530.1-201ENST00000575312 1977 ntBASIC25.55■■□□□ 1.68
VPS33BQ9H267 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS33BQ9H267 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
VPS33BQ9H267 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS33BQ9H267 AC245052.3-201ENST00000450182 901 ntBASIC25.55■■□□□ 1.68
VPS33BQ9H267 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.55■■□□□ 1.68
VPS33BQ9H267 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC25.55■■□□□ 1.68
VPS33BQ9H267 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC25.55■■□□□ 1.68
VPS33BQ9H267 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS33BQ9H267 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.55■■□□□ 1.68
VPS33BQ9H267 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS33BQ9H267 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.54■■□□□ 1.68
VPS33BQ9H267 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
VPS33BQ9H267 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC25.54■■□□□ 1.68
VPS33BQ9H267 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
VPS33BQ9H267 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
VPS33BQ9H267 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.54■■□□□ 1.68
VPS33BQ9H267 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
VPS33BQ9H267 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
VPS33BQ9H267 FAM197Y4-202ENST00000622692 608 ntBASIC25.54■■□□□ 1.68
VPS33BQ9H267 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.54■■□□□ 1.68
VPS33BQ9H267 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
VPS33BQ9H267 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
VPS33BQ9H267 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
VPS33BQ9H267 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
VPS33BQ9H267 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
VPS33BQ9H267 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC25.53■■□□□ 1.68
VPS33BQ9H267 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
VPS33BQ9H267 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.53■■□□□ 1.68
VPS33BQ9H267 C1QBPP2-201ENST00000528754 825 ntBASIC25.53■■□□□ 1.68
VPS33BQ9H267 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC25.53■■□□□ 1.68
VPS33BQ9H267 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
VPS33BQ9H267 AC073912.3-201ENST00000624414 853 ntBASIC25.53■■□□□ 1.68
VPS33BQ9H267 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.53■■□□□ 1.68
VPS33BQ9H267 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
VPS33BQ9H267 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
VPS33BQ9H267 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.52■■□□□ 1.68
VPS33BQ9H267 AC003102.1-202ENST00000563394 1796 ntBASIC25.52■■□□□ 1.68
VPS33BQ9H267 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.52■■□□□ 1.68
VPS33BQ9H267 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
VPS33BQ9H267 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
VPS33BQ9H267 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
VPS33BQ9H267 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.52■■□□□ 1.68
VPS33BQ9H267 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC25.52■■□□□ 1.68
VPS33BQ9H267 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
VPS33BQ9H267 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
VPS33BQ9H267 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
VPS33BQ9H267 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
VPS33BQ9H267 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
VPS33BQ9H267 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
VPS33BQ9H267 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.51■■□□□ 1.67
VPS33BQ9H267 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
VPS33BQ9H267 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC25.51■■□□□ 1.67
VPS33BQ9H267 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC25.51■■□□□ 1.67
VPS33BQ9H267 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
VPS33BQ9H267 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
VPS33BQ9H267 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.51■■□□□ 1.67
VPS33BQ9H267 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
VPS33BQ9H267 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
VPS33BQ9H267 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
VPS33BQ9H267 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
VPS33BQ9H267 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
VPS33BQ9H267 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
VPS33BQ9H267 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
VPS33BQ9H267 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
VPS33BQ9H267 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
VPS33BQ9H267 KRT18P68-201ENST00000392293 1000 ntBASIC25.5■■□□□ 1.67
VPS33BQ9H267 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
VPS33BQ9H267 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
VPS33BQ9H267 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
VPS33BQ9H267 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
VPS33BQ9H267 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
VPS33BQ9H267 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
VPS33BQ9H267 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC25.5■■□□□ 1.67
VPS33BQ9H267 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
VPS33BQ9H267 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.5■■□□□ 1.67
VPS33BQ9H267 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
VPS33BQ9H267 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.49■■□□□ 1.67
VPS33BQ9H267 AC092368.3-202ENST00000574180 1591 ntBASIC25.49■■□□□ 1.67
VPS33BQ9H267 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
VPS33BQ9H267 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.49■■□□□ 1.67
VPS33BQ9H267 NXN-202ENST00000537628 1340 ntTSL 3 BASIC25.49■■□□□ 1.67
VPS33BQ9H267 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
VPS33BQ9H267 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC25.49■■□□□ 1.67
VPS33BQ9H267 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.49■■□□□ 1.67
VPS33BQ9H267 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
VPS33BQ9H267 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
VPS33BQ9H267 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms