Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALX4Q9H161 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.72■□□□□ 0.43
ALX4Q9H161 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALX4Q9H161 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALX4Q9H161 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALX4Q9H161 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.72■□□□□ 0.43
ALX4Q9H161 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALX4Q9H161 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.72■□□□□ 0.43
ALX4Q9H161 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.72■□□□□ 0.43
ALX4Q9H161 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.72■□□□□ 0.43
ALX4Q9H161 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALX4Q9H161 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.72■□□□□ 0.43
ALX4Q9H161 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.72■□□□□ 0.43
ALX4Q9H161 MIR6722-201ENST00000617286 78 ntBASIC17.72■□□□□ 0.43
ALX4Q9H161 AL117332.1-201ENST00000622628 974 ntBASIC17.72■□□□□ 0.43
ALX4Q9H161 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
ALX4Q9H161 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALX4Q9H161 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALX4Q9H161 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ALX4Q9H161 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALX4Q9H161 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALX4Q9H161 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALX4Q9H161 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALX4Q9H161 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALX4Q9H161 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALX4Q9H161 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.71■□□□□ 0.43
ALX4Q9H161 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.71■□□□□ 0.43
ALX4Q9H161 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALX4Q9H161 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALX4Q9H161 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.71■□□□□ 0.43
ALX4Q9H161 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.71■□□□□ 0.43
ALX4Q9H161 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALX4Q9H161 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.71■□□□□ 0.43
ALX4Q9H161 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ALX4Q9H161 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.71■□□□□ 0.43
ALX4Q9H161 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALX4Q9H161 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ALX4Q9H161 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ALX4Q9H161 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
ALX4Q9H161 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALX4Q9H161 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALX4Q9H161 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
ALX4Q9H161 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ALX4Q9H161 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.7■□□□□ 0.42
ALX4Q9H161 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALX4Q9H161 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ALX4Q9H161 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.7■□□□□ 0.42
ALX4Q9H161 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ALX4Q9H161 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALX4Q9H161 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.7■□□□□ 0.42
ALX4Q9H161 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.7■□□□□ 0.42
ALX4Q9H161 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.7■□□□□ 0.42
ALX4Q9H161 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.7■□□□□ 0.42
ALX4Q9H161 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALX4Q9H161 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
ALX4Q9H161 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
ALX4Q9H161 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ALX4Q9H161 AC005703.6-201ENST00000623265 1329 ntBASIC17.7■□□□□ 0.42
ALX4Q9H161 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.69■□□□□ 0.42
ALX4Q9H161 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ALX4Q9H161 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALX4Q9H161 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALX4Q9H161 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.69■□□□□ 0.42
ALX4Q9H161 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALX4Q9H161 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALX4Q9H161 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.69■□□□□ 0.42
ALX4Q9H161 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALX4Q9H161 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALX4Q9H161 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALX4Q9H161 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALX4Q9H161 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.69■□□□□ 0.42
ALX4Q9H161 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.69■□□□□ 0.42
ALX4Q9H161 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.69■□□□□ 0.42
ALX4Q9H161 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.69■□□□□ 0.42
ALX4Q9H161 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALX4Q9H161 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ALX4Q9H161 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALX4Q9H161 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALX4Q9H161 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ALX4Q9H161 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALX4Q9H161 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALX4Q9H161 BX323043.1-201ENST00000641006 1765 ntBASIC17.68■□□□□ 0.42
ALX4Q9H161 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ALX4Q9H161 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALX4Q9H161 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALX4Q9H161 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALX4Q9H161 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALX4Q9H161 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALX4Q9H161 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALX4Q9H161 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALX4Q9H161 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.68■□□□□ 0.42
ALX4Q9H161 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.68■□□□□ 0.42
ALX4Q9H161 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.68■□□□□ 0.42
ALX4Q9H161 OR7E47P-201ENST00000546390 1422 ntBASIC17.68■□□□□ 0.42
ALX4Q9H161 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALX4Q9H161 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ALX4Q9H161 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALX4Q9H161 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.68■□□□□ 0.42
ALX4Q9H161 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.68■□□□□ 0.42
ALX4Q9H161 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms