Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE1Q99829 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21■□□□□ 0.95
CPNE1Q99829 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE1Q99829 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPNE1Q99829 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21■□□□□ 0.95
CPNE1Q99829 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21■□□□□ 0.95
CPNE1Q99829 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21■□□□□ 0.95
CPNE1Q99829 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE1Q99829 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPNE1Q99829 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21■□□□□ 0.95
CPNE1Q99829 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CPNE1Q99829 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE1Q99829 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE1Q99829 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE1Q99829 SLC25A24-204ENST00000569674 2357 ntBASIC20.99■□□□□ 0.95
CPNE1Q99829 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE1Q99829 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE1Q99829 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.99■□□□□ 0.95
CPNE1Q99829 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.99■□□□□ 0.95
CPNE1Q99829 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.99■□□□□ 0.95
CPNE1Q99829 AC008764.7-201ENST00000593779 1081 ntBASIC20.99■□□□□ 0.95
CPNE1Q99829 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE1Q99829 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE1Q99829 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.99■□□□□ 0.95
CPNE1Q99829 FEM1AP1-201ENST00000431297 1995 ntBASIC20.99■□□□□ 0.95
CPNE1Q99829 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE1Q99829 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE1Q99829 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE1Q99829 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE1Q99829 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE1Q99829 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE1Q99829 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CPNE1Q99829 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
CPNE1Q99829 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CPNE1Q99829 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE1Q99829 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CPNE1Q99829 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.98■□□□□ 0.95
CPNE1Q99829 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.98■□□□□ 0.95
CPNE1Q99829 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.98■□□□□ 0.95
CPNE1Q99829 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE1Q99829 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE1Q99829 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CPNE1Q99829 AC006128.1-201ENST00000624704 1661 ntBASIC20.98■□□□□ 0.95
CPNE1Q99829 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.98■□□□□ 0.95
CPNE1Q99829 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE1Q99829 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE1Q99829 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE1Q99829 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.97■□□□□ 0.95
CPNE1Q99829 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CPNE1Q99829 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CPNE1Q99829 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 AC099791.1-201ENST00000416440 715 ntBASIC20.97■□□□□ 0.95
CPNE1Q99829 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CPNE1Q99829 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.97■□□□□ 0.95
CPNE1Q99829 AC131212.1-201ENST00000613771 668 ntBASIC20.97■□□□□ 0.95
CPNE1Q99829 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CPNE1Q99829 AC105233.4-201ENST00000642045 216 ntBASIC20.97■□□□□ 0.95
CPNE1Q99829 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CPNE1Q99829 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CPNE1Q99829 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.97■□□□□ 0.95
CPNE1Q99829 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE1Q99829 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE1Q99829 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE1Q99829 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CPNE1Q99829 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE1Q99829 AC005224.4-201ENST00000583262 1652 ntBASIC20.96■□□□□ 0.95
CPNE1Q99829 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE1Q99829 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.96■□□□□ 0.95
CPNE1Q99829 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.96■□□□□ 0.95
CPNE1Q99829 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE1Q99829 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE1Q99829 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CPNE1Q99829 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.96■□□□□ 0.95
CPNE1Q99829 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.96■□□□□ 0.95
CPNE1Q99829 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE1Q99829 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.96■□□□□ 0.95
CPNE1Q99829 AC027682.1-201ENST00000562846 899 ntBASIC20.96■□□□□ 0.95
CPNE1Q99829 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.96■□□□□ 0.95
CPNE1Q99829 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.96■□□□□ 0.95
CPNE1Q99829 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE1Q99829 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE1Q99829 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CPNE1Q99829 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CPNE1Q99829 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.96■□□□□ 0.95
CPNE1Q99829 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE1Q99829 LINC01006-201ENST00000333319 2292 ntBASIC20.95■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms