Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LITAFQ99732 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LITAFQ99732 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LITAFQ99732 AC007225.1-201ENST00000566331 1836 ntBASIC14.03□□□□□ -0.16
LITAFQ99732 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.03□□□□□ -0.16
LITAFQ99732 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LITAFQ99732 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
LITAFQ99732 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LITAFQ99732 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LITAFQ99732 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LITAFQ99732 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LITAFQ99732 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LITAFQ99732 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LITAFQ99732 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LITAFQ99732 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LITAFQ99732 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LITAFQ99732 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LITAFQ99732 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LITAFQ99732 MTX2-204ENST00000443241 799 ntTSL 3 BASIC14.02□□□□□ -0.17
LITAFQ99732 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC14.02□□□□□ -0.17
LITAFQ99732 AL031602.1-201ENST00000633169 911 ntBASIC14.02□□□□□ -0.17
LITAFQ99732 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LITAFQ99732 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
LITAFQ99732 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LITAFQ99732 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LITAFQ99732 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LITAFQ99732 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LITAFQ99732 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LITAFQ99732 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LITAFQ99732 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LITAFQ99732 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LITAFQ99732 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LITAFQ99732 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LITAFQ99732 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LITAFQ99732 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.01□□□□□ -0.17
LITAFQ99732 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.01□□□□□ -0.17
LITAFQ99732 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LITAFQ99732 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.01□□□□□ -0.17
LITAFQ99732 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC14.01□□□□□ -0.17
LITAFQ99732 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.01□□□□□ -0.17
LITAFQ99732 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LITAFQ99732 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
LITAFQ99732 TNXA-203ENST00000507684 2038 ntBASIC14.01□□□□□ -0.17
LITAFQ99732 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LITAFQ99732 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LITAFQ99732 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LITAFQ99732 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LITAFQ99732 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.01□□□□□ -0.17
LITAFQ99732 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LITAFQ99732 AP000974.1-201ENST00000623909 2387 ntBASIC14.01□□□□□ -0.17
LITAFQ99732 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.01□□□□□ -0.17
LITAFQ99732 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LITAFQ99732 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14□□□□□ -0.17
LITAFQ99732 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LITAFQ99732 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC14□□□□□ -0.17
LITAFQ99732 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14□□□□□ -0.17
LITAFQ99732 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LITAFQ99732 AC005703.6-201ENST00000623265 1329 ntBASIC14□□□□□ -0.17
LITAFQ99732 HYI-210ENST00000486909 905 ntTSL 5 BASIC14□□□□□ -0.17
LITAFQ99732 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LITAFQ99732 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14□□□□□ -0.17
LITAFQ99732 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC14□□□□□ -0.17
LITAFQ99732 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LITAFQ99732 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LITAFQ99732 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LITAFQ99732 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LITAFQ99732 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LITAFQ99732 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LITAFQ99732 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14□□□□□ -0.17
LITAFQ99732 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
LITAFQ99732 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14□□□□□ -0.17
LITAFQ99732 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LITAFQ99732 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LITAFQ99732 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LITAFQ99732 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LITAFQ99732 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14□□□□□ -0.17
LITAFQ99732 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14□□□□□ -0.17
LITAFQ99732 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LITAFQ99732 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.99□□□□□ -0.17
LITAFQ99732 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.99□□□□□ -0.17
LITAFQ99732 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LITAFQ99732 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LITAFQ99732 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
LITAFQ99732 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LITAFQ99732 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LITAFQ99732 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LITAFQ99732 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LITAFQ99732 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LITAFQ99732 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LITAFQ99732 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LITAFQ99732 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC13.99□□□□□ -0.17
LITAFQ99732 NKILA-201ENST00000613231 537 ntTSL 4 BASIC13.99□□□□□ -0.17
LITAFQ99732 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC13.99□□□□□ -0.17
LITAFQ99732 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC13.99□□□□□ -0.17
LITAFQ99732 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LITAFQ99732 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LITAFQ99732 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LITAFQ99732 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LITAFQ99732 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC13.99□□□□□ -0.17
LITAFQ99732 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms