Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.84■□□□□ 0.13
AP1S3Q96PC3 AC010980.1-201ENST00000587192 1142 ntBASIC15.84■□□□□ 0.13
AP1S3Q96PC3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP1S3Q96PC3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP1S3Q96PC3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP1S3Q96PC3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP1S3Q96PC3 AC026310.3-201ENST00000625186 2373 ntBASIC15.84■□□□□ 0.13
AP1S3Q96PC3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP1S3Q96PC3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP1S3Q96PC3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP1S3Q96PC3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP1S3Q96PC3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.84■□□□□ 0.13
AP1S3Q96PC3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
AP1S3Q96PC3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.84■□□□□ 0.13
AP1S3Q96PC3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
AP1S3Q96PC3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
AP1S3Q96PC3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
AP1S3Q96PC3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
AP1S3Q96PC3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 ATP5G2P3-201ENST00000429083 425 ntBASIC15.83■□□□□ 0.12
AP1S3Q96PC3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP1S3Q96PC3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 PVT1_1.1-201ENST00000615125 194 ntBASIC15.82■□□□□ 0.12
AP1S3Q96PC3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
AP1S3Q96PC3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 AC020763.4-201ENST00000623414 4170 ntBASIC15.81■□□□□ 0.12
AP1S3Q96PC3 HTR7P1-202ENST00000624664 4411 ntBASIC15.81■□□□□ 0.12
AP1S3Q96PC3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 MIR4508-201ENST00000584178 70 ntBASIC15.81■□□□□ 0.12
AP1S3Q96PC3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S3Q96PC3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 AC004987.1-201ENST00000428627 508 ntBASIC15.8■□□□□ 0.12
AP1S3Q96PC3 DUX4L4-201ENST00000566884 1269 ntBASIC15.8■□□□□ 0.12
AP1S3Q96PC3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 AC244015.2-201ENST00000616358 1861 ntBASIC15.8■□□□□ 0.12
AP1S3Q96PC3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms