Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAX2Q96IS3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAX2Q96IS3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAX2Q96IS3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAX2Q96IS3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAX2Q96IS3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAX2Q96IS3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.34■□□□□ 0.21
RAX2Q96IS3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.34■□□□□ 0.21
RAX2Q96IS3 KRT18P20-201ENST00000548986 1279 ntBASIC16.34■□□□□ 0.21
RAX2Q96IS3 DUX4L16-201ENST00000555130 1264 ntBASIC16.34■□□□□ 0.21
RAX2Q96IS3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.34■□□□□ 0.21
RAX2Q96IS3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RAX2Q96IS3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
RAX2Q96IS3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.34■□□□□ 0.21
RAX2Q96IS3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
RAX2Q96IS3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAX2Q96IS3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAX2Q96IS3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAX2Q96IS3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.34■□□□□ 0.21
RAX2Q96IS3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAX2Q96IS3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAX2Q96IS3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAX2Q96IS3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
RAX2Q96IS3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.33■□□□□ 0.21
RAX2Q96IS3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RAX2Q96IS3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAX2Q96IS3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAX2Q96IS3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RAX2Q96IS3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAX2Q96IS3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.33■□□□□ 0.2
RAX2Q96IS3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RAX2Q96IS3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.33■□□□□ 0.2
RAX2Q96IS3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.33■□□□□ 0.2
RAX2Q96IS3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAX2Q96IS3 AIRN-201ENST00000601203 4374 ntBASIC16.33■□□□□ 0.2
RAX2Q96IS3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAX2Q96IS3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAX2Q96IS3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAX2Q96IS3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAX2Q96IS3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAX2Q96IS3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAX2Q96IS3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
RAX2Q96IS3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAX2Q96IS3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.32■□□□□ 0.2
RAX2Q96IS3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RAX2Q96IS3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAX2Q96IS3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAX2Q96IS3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAX2Q96IS3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAX2Q96IS3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAX2Q96IS3 AC007322.1-201ENST00000426983 750 ntBASIC16.32■□□□□ 0.2
RAX2Q96IS3 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.32■□□□□ 0.2
RAX2Q96IS3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAX2Q96IS3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAX2Q96IS3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.32■□□□□ 0.2
RAX2Q96IS3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAX2Q96IS3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAX2Q96IS3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.32■□□□□ 0.2
RAX2Q96IS3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.32■□□□□ 0.2
RAX2Q96IS3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.32■□□□□ 0.2
RAX2Q96IS3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
RAX2Q96IS3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.32■□□□□ 0.2
RAX2Q96IS3 AC231657.2-201ENST00000624556 255 ntBASIC16.32■□□□□ 0.2
RAX2Q96IS3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAX2Q96IS3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAX2Q96IS3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 AC080038.3-201ENST00000623346 1952 ntBASIC16.31■□□□□ 0.2
RAX2Q96IS3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.31■□□□□ 0.2
RAX2Q96IS3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAX2Q96IS3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.31■□□□□ 0.2
RAX2Q96IS3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.31■□□□□ 0.2
RAX2Q96IS3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.31■□□□□ 0.2
RAX2Q96IS3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.31■□□□□ 0.2
RAX2Q96IS3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAX2Q96IS3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.31■□□□□ 0.2
RAX2Q96IS3 AC127496.7-201ENST00000625110 1798 ntBASIC16.31■□□□□ 0.2
RAX2Q96IS3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.31■□□□□ 0.2
RAX2Q96IS3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
RAX2Q96IS3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAX2Q96IS3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAX2Q96IS3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAX2Q96IS3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAX2Q96IS3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAX2Q96IS3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAX2Q96IS3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAX2Q96IS3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms