Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.57■□□□□ 0.72
CTHRC1Q96CG8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 KRT18P5-201ENST00000436075 1291 ntBASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 KRT18P20-201ENST00000548986 1279 ntBASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTHRC1Q96CG8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CTHRC1Q96CG8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 KRT16P2-201ENST00000414673 1423 ntBASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 AL162430.1-201ENST00000480705 870 ntBASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CTHRC1Q96CG8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.53■□□□□ 0.72
CTHRC1Q96CG8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.52■□□□□ 0.72
CTHRC1Q96CG8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTHRC1Q96CG8 AL049796.1-201ENST00000565336 1766 ntBASIC19.52■□□□□ 0.72
CTHRC1Q96CG8 AF106564.1-201ENST00000607058 2553 ntBASIC19.52■□□□□ 0.72
CTHRC1Q96CG8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTHRC1Q96CG8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTHRC1Q96CG8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTHRC1Q96CG8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.52■□□□□ 0.72
CTHRC1Q96CG8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.52■□□□□ 0.72
CTHRC1Q96CG8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.52■□□□□ 0.72
CTHRC1Q96CG8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.52■□□□□ 0.72
CTHRC1Q96CG8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTHRC1Q96CG8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTHRC1Q96CG8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTHRC1Q96CG8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 SLC7A5P1-201ENST00000568957 537 ntBASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CTHRC1Q96CG8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms