Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RHBDF1Q96CC6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.47■□□□□ 0.87
RHBDF1Q96CC6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.47■□□□□ 0.87
RHBDF1Q96CC6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
RHBDF1Q96CC6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RHBDF1Q96CC6 AC053503.5-201ENST00000601508 636 ntBASIC20.47■□□□□ 0.87
RHBDF1Q96CC6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.47■□□□□ 0.87
RHBDF1Q96CC6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.47■□□□□ 0.87
RHBDF1Q96CC6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RHBDF1Q96CC6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RHBDF1Q96CC6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RHBDF1Q96CC6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RHBDF1Q96CC6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RHBDF1Q96CC6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
RHBDF1Q96CC6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RHBDF1Q96CC6 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.45■□□□□ 0.86
RHBDF1Q96CC6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RHBDF1Q96CC6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RHBDF1Q96CC6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RHBDF1Q96CC6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RHBDF1Q96CC6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RHBDF1Q96CC6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RHBDF1Q96CC6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.45■□□□□ 0.86
RHBDF1Q96CC6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.45■□□□□ 0.86
RHBDF1Q96CC6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.44■□□□□ 0.86
RHBDF1Q96CC6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.44■□□□□ 0.86
RHBDF1Q96CC6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDF1Q96CC6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDF1Q96CC6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDF1Q96CC6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.44■□□□□ 0.86
RHBDF1Q96CC6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.43■□□□□ 0.86
RHBDF1Q96CC6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDF1Q96CC6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RHBDF1Q96CC6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RHBDF1Q96CC6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDF1Q96CC6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDF1Q96CC6 AC079140.4-201ENST00000507448 529 ntBASIC20.43■□□□□ 0.86
RHBDF1Q96CC6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.43■□□□□ 0.86
RHBDF1Q96CC6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDF1Q96CC6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RHBDF1Q96CC6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDF1Q96CC6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RHBDF1Q96CC6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 LINC02228-203ENST00000641970 1355 ntBASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 KRT87P-202ENST00000534226 1464 ntBASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDF1Q96CC6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 ZNRF2P3-201ENST00000424200 374 ntBASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 AC123595.1-201ENST00000440769 1046 ntBASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDF1Q96CC6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.4■□□□□ 0.86
RHBDF1Q96CC6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDF1Q96CC6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDF1Q96CC6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDF1Q96CC6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDF1Q96CC6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.4■□□□□ 0.86
RHBDF1Q96CC6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RHBDF1Q96CC6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RHBDF1Q96CC6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.4■□□□□ 0.86
RHBDF1Q96CC6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms