Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX1Q92499 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX1Q92499 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX1Q92499 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.45■■□□□ 1.18
DDX1Q92499 EEF1DP3-203ENST00000566025 782 ntBASIC22.45■■□□□ 1.18
DDX1Q92499 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.45■■□□□ 1.18
DDX1Q92499 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.45■■□□□ 1.18
DDX1Q92499 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX1Q92499 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
DDX1Q92499 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.45■■□□□ 1.18
DDX1Q92499 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX1Q92499 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
DDX1Q92499 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DDX1Q92499 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
DDX1Q92499 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.44■■□□□ 1.18
DDX1Q92499 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
DDX1Q92499 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
DDX1Q92499 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.44■■□□□ 1.18
DDX1Q92499 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.44■■□□□ 1.18
DDX1Q92499 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DDX1Q92499 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.44■■□□□ 1.18
DDX1Q92499 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX1Q92499 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX1Q92499 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX1Q92499 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.43■■□□□ 1.18
DDX1Q92499 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.43■■□□□ 1.18
DDX1Q92499 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX1Q92499 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX1Q92499 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.43■■□□□ 1.18
DDX1Q92499 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX1Q92499 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX1Q92499 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
DDX1Q92499 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.43■■□□□ 1.18
DDX1Q92499 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX1Q92499 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX1Q92499 AL049796.1-201ENST00000565336 1766 ntBASIC22.43■■□□□ 1.18
DDX1Q92499 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX1Q92499 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX1Q92499 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.42■■□□□ 1.18
DDX1Q92499 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX1Q92499 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
DDX1Q92499 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
DDX1Q92499 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
DDX1Q92499 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
DDX1Q92499 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
DDX1Q92499 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.41■■□□□ 1.18
DDX1Q92499 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX1Q92499 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DDX1Q92499 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.41■■□□□ 1.18
DDX1Q92499 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.41■■□□□ 1.18
DDX1Q92499 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX1Q92499 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
DDX1Q92499 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
DDX1Q92499 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.41■■□□□ 1.18
DDX1Q92499 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.41■■□□□ 1.18
DDX1Q92499 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.41■■□□□ 1.18
DDX1Q92499 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DDX1Q92499 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.41■■□□□ 1.18
DDX1Q92499 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX1Q92499 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
DDX1Q92499 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX1Q92499 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX1Q92499 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
DDX1Q92499 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.4■■□□□ 1.18
DDX1Q92499 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.4■■□□□ 1.18
DDX1Q92499 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DDX1Q92499 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DDX1Q92499 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DDX1Q92499 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.4■■□□□ 1.18
DDX1Q92499 AC053503.5-201ENST00000601508 636 ntBASIC22.4■■□□□ 1.18
DDX1Q92499 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
DDX1Q92499 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DDX1Q92499 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.39■■□□□ 1.18
DDX1Q92499 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.39■■□□□ 1.18
DDX1Q92499 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
DDX1Q92499 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
DDX1Q92499 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX1Q92499 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
DDX1Q92499 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.39■■□□□ 1.17
DDX1Q92499 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.39■■□□□ 1.17
DDX1Q92499 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.39■■□□□ 1.17
DDX1Q92499 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX1Q92499 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX1Q92499 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DDX1Q92499 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.38■■□□□ 1.17
DDX1Q92499 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.38■■□□□ 1.17
DDX1Q92499 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DDX1Q92499 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.38■■□□□ 1.17
DDX1Q92499 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
DDX1Q92499 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.38■■□□□ 1.17
DDX1Q92499 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DDX1Q92499 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.38■■□□□ 1.17
DDX1Q92499 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.38■■□□□ 1.17
DDX1Q92499 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
DDX1Q92499 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DDX1Q92499 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
DDX1Q92499 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
DDX1Q92499 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DDX1Q92499 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DDX1Q92499 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms