Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 EEF1DP3-203ENST00000566025 782 ntBASIC20.5■□□□□ 0.87
ATL1Q8WXF7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 KRT87P-202ENST00000534226 1464 ntBASIC20.5■□□□□ 0.87
ATL1Q8WXF7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.49■□□□□ 0.87
ATL1Q8WXF7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATL1Q8WXF7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATL1Q8WXF7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATL1Q8WXF7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATL1Q8WXF7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ATL1Q8WXF7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATL1Q8WXF7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.47■□□□□ 0.87
ATL1Q8WXF7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.47■□□□□ 0.87
ATL1Q8WXF7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.47■□□□□ 0.87
ATL1Q8WXF7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATL1Q8WXF7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATL1Q8WXF7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATL1Q8WXF7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 FEM1AP4-201ENST00000443167 1987 ntBASIC20.46■□□□□ 0.87
ATL1Q8WXF7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATL1Q8WXF7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATL1Q8WXF7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATL1Q8WXF7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.45■□□□□ 0.86
ATL1Q8WXF7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.45■□□□□ 0.86
ATL1Q8WXF7 TERF1P2-201ENST00000583350 1212 ntBASIC20.45■□□□□ 0.86
ATL1Q8WXF7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATL1Q8WXF7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATL1Q8WXF7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATL1Q8WXF7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATL1Q8WXF7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms