Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.88■■□□□ 1.09
SH3RF2Q8TEC5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF2Q8TEC5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
SH3RF2Q8TEC5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF2Q8TEC5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.87■■□□□ 1.09
SH3RF2Q8TEC5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.87■■□□□ 1.09
SH3RF2Q8TEC5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.87■■□□□ 1.09
SH3RF2Q8TEC5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.87■■□□□ 1.09
SH3RF2Q8TEC5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF2Q8TEC5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF2Q8TEC5 KRT16P2-201ENST00000414673 1423 ntBASIC21.87■■□□□ 1.09
SH3RF2Q8TEC5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF2Q8TEC5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.87■■□□□ 1.09
SH3RF2Q8TEC5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SH3RF2Q8TEC5 AC061975.6-201ENST00000579045 1553 ntBASIC21.87■■□□□ 1.09
SH3RF2Q8TEC5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
SH3RF2Q8TEC5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF2Q8TEC5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF2Q8TEC5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF2Q8TEC5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF2Q8TEC5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.86■■□□□ 1.09
SH3RF2Q8TEC5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.86■■□□□ 1.09
SH3RF2Q8TEC5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.86■■□□□ 1.09
SH3RF2Q8TEC5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF2Q8TEC5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF2Q8TEC5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF2Q8TEC5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF2Q8TEC5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF2Q8TEC5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF2Q8TEC5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF2Q8TEC5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF2Q8TEC5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF2Q8TEC5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF2Q8TEC5 CD99P1-205ENST00000527459 561 ntBASIC21.84■■□□□ 1.09
SH3RF2Q8TEC5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.84■■□□□ 1.09
SH3RF2Q8TEC5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.84■■□□□ 1.09
SH3RF2Q8TEC5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SH3RF2Q8TEC5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.84■■□□□ 1.09
SH3RF2Q8TEC5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.84■■□□□ 1.09
SH3RF2Q8TEC5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF2Q8TEC5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF2Q8TEC5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.83■■□□□ 1.09
SH3RF2Q8TEC5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
SH3RF2Q8TEC5 AC026471.6-201ENST00000622954 1905 ntBASIC21.83■■□□□ 1.09
SH3RF2Q8TEC5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
SH3RF2Q8TEC5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SH3RF2Q8TEC5 ABHD17AP1-201ENST00000358206 933 ntBASIC21.83■■□□□ 1.09
SH3RF2Q8TEC5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SH3RF2Q8TEC5 AC069152.1-201ENST00000438030 544 ntBASIC21.83■■□□□ 1.09
SH3RF2Q8TEC5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
SH3RF2Q8TEC5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.83■■□□□ 1.09
SH3RF2Q8TEC5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
SH3RF2Q8TEC5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.83■■□□□ 1.09
SH3RF2Q8TEC5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.83■■□□□ 1.08
SH3RF2Q8TEC5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SH3RF2Q8TEC5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SH3RF2Q8TEC5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 RBM17P2-201ENST00000616397 1405 ntBASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 AC098934.4-201ENST00000564127 592 ntBASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 AC008694.1-202ENST00000636953 945 ntBASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF2Q8TEC5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms