Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
CCER1Q8TC90 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCER1Q8TC90 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCER1Q8TC90 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CCER1Q8TC90 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
CCER1Q8TC90 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCER1Q8TC90 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCER1Q8TC90 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCER1Q8TC90 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCER1Q8TC90 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CCER1Q8TC90 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCER1Q8TC90 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC31.3■■■□□ 2.6
CCER1Q8TC90 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC31.3■■■□□ 2.6
CCER1Q8TC90 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CCER1Q8TC90 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CCER1Q8TC90 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC31.3■■■□□ 2.6
CCER1Q8TC90 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
CCER1Q8TC90 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCER1Q8TC90 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCER1Q8TC90 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCER1Q8TC90 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CCER1Q8TC90 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCER1Q8TC90 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CCER1Q8TC90 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC31.29■■■□□ 2.6
CCER1Q8TC90 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC31.29■■■□□ 2.6
CCER1Q8TC90 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
CCER1Q8TC90 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
CCER1Q8TC90 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
CCER1Q8TC90 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCER1Q8TC90 AC092667.1-201ENST00000434301 2586 ntBASIC31.28■■■□□ 2.6
CCER1Q8TC90 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CCER1Q8TC90 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC31.28■■■□□ 2.6
CCER1Q8TC90 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCER1Q8TC90 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCER1Q8TC90 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCER1Q8TC90 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC31.28■■■□□ 2.6
CCER1Q8TC90 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCER1Q8TC90 AC024257.2-201ENST00000549699 147 ntBASIC31.28■■■□□ 2.6
CCER1Q8TC90 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC31.28■■■□□ 2.6
CCER1Q8TC90 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC31.28■■■□□ 2.6
CCER1Q8TC90 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC31.28■■■□□ 2.6
CCER1Q8TC90 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCER1Q8TC90 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCER1Q8TC90 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCER1Q8TC90 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CCER1Q8TC90 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CCER1Q8TC90 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCER1Q8TC90 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCER1Q8TC90 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC31.27■■■□□ 2.6
CCER1Q8TC90 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC31.27■■■□□ 2.6
CCER1Q8TC90 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.27■■■□□ 2.6
CCER1Q8TC90 AC233992.3-201ENST00000607491 485 ntBASIC31.27■■■□□ 2.6
CCER1Q8TC90 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCER1Q8TC90 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
CCER1Q8TC90 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CCER1Q8TC90 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCER1Q8TC90 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCER1Q8TC90 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC31.26■■■□□ 2.6
CCER1Q8TC90 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
CCER1Q8TC90 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCER1Q8TC90 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCER1Q8TC90 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC31.26■■■□□ 2.59
CCER1Q8TC90 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
CCER1Q8TC90 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC31.25■■■□□ 2.59
CCER1Q8TC90 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCER1Q8TC90 PLK5-205ENST00000642079 1969 ntBASIC31.25■■■□□ 2.59
CCER1Q8TC90 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC31.25■■■□□ 2.59
CCER1Q8TC90 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCER1Q8TC90 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.25■■■□□ 2.59
CCER1Q8TC90 AC126544.1-201ENST00000580842 1059 ntBASIC31.25■■■□□ 2.59
CCER1Q8TC90 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCER1Q8TC90 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCER1Q8TC90 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC31.25■■■□□ 2.59
CCER1Q8TC90 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
CCER1Q8TC90 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCER1Q8TC90 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CCER1Q8TC90 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCER1Q8TC90 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CCER1Q8TC90 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC31.24■■■□□ 2.59
CCER1Q8TC90 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
CCER1Q8TC90 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC31.24■■■□□ 2.59
CCER1Q8TC90 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC31.24■■■□□ 2.59
CCER1Q8TC90 AL136162.1-201ENST00000607711 1078 ntBASIC31.24■■■□□ 2.59
CCER1Q8TC90 STX5-203ENST00000394690 1568 ntTSL 5 BASIC31.24■■■□□ 2.59
CCER1Q8TC90 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
CCER1Q8TC90 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCER1Q8TC90 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
CCER1Q8TC90 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
CCER1Q8TC90 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CCER1Q8TC90 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC31.23■■■□□ 2.59
CCER1Q8TC90 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCER1Q8TC90 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCER1Q8TC90 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CCER1Q8TC90 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CCER1Q8TC90 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
CCER1Q8TC90 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCER1Q8TC90 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
CCER1Q8TC90 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC31.22■■■□□ 2.59
CCER1Q8TC90 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCER1Q8TC90 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms