Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CPSF7Q8N684 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF7Q8N684 RASA4CP-201ENST00000424092 1398 ntBASIC20.51■□□□□ 0.87
CPSF7Q8N684 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF7Q8N684 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF7Q8N684 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF7Q8N684 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.51■□□□□ 0.87
CPSF7Q8N684 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.51■□□□□ 0.87
CPSF7Q8N684 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.51■□□□□ 0.87
CPSF7Q8N684 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CPSF7Q8N684 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.51■□□□□ 0.87
CPSF7Q8N684 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF7Q8N684 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CPSF7Q8N684 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF7Q8N684 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CPSF7Q8N684 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF7Q8N684 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.5■□□□□ 0.87
CPSF7Q8N684 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF7Q8N684 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF7Q8N684 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.5■□□□□ 0.87
CPSF7Q8N684 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.5■□□□□ 0.87
CPSF7Q8N684 pRNA.6-201ENST00000610482 90 ntBASIC20.5■□□□□ 0.87
CPSF7Q8N684 pRNA.5-201ENST00000612139 90 ntBASIC20.5■□□□□ 0.87
CPSF7Q8N684 pRNA.11-201ENST00000618423 90 ntBASIC20.5■□□□□ 0.87
CPSF7Q8N684 pRNA.13-201ENST00000619112 90 ntBASIC20.5■□□□□ 0.87
CPSF7Q8N684 AC068587.7-201ENST00000641602 218 ntBASIC20.5■□□□□ 0.87
CPSF7Q8N684 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF7Q8N684 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
CPSF7Q8N684 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
CPSF7Q8N684 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.5■□□□□ 0.87
CPSF7Q8N684 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF7Q8N684 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.5■□□□□ 0.87
CPSF7Q8N684 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF7Q8N684 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF7Q8N684 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF7Q8N684 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.5■□□□□ 0.87
CPSF7Q8N684 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF7Q8N684 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF7Q8N684 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF7Q8N684 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.5■□□□□ 0.87
CPSF7Q8N684 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF7Q8N684 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF7Q8N684 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF7Q8N684 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF7Q8N684 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF7Q8N684 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF7Q8N684 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.49■□□□□ 0.87
CPSF7Q8N684 AC099791.1-201ENST00000416440 715 ntBASIC20.49■□□□□ 0.87
CPSF7Q8N684 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF7Q8N684 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CPSF7Q8N684 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CPSF7Q8N684 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CPSF7Q8N684 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF7Q8N684 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF7Q8N684 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CPSF7Q8N684 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.48■□□□□ 0.87
CPSF7Q8N684 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
CPSF7Q8N684 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CPSF7Q8N684 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CPSF7Q8N684 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CPSF7Q8N684 GABARAPL3-202ENST00000624044 1851 ntBASIC20.48■□□□□ 0.87
CPSF7Q8N684 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF7Q8N684 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF7Q8N684 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF7Q8N684 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.48■□□□□ 0.87
CPSF7Q8N684 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF7Q8N684 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CPSF7Q8N684 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.48■□□□□ 0.87
CPSF7Q8N684 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.48■□□□□ 0.87
CPSF7Q8N684 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF7Q8N684 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.48■□□□□ 0.87
CPSF7Q8N684 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.48■□□□□ 0.87
CPSF7Q8N684 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.48■□□□□ 0.87
CPSF7Q8N684 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF7Q8N684 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF7Q8N684 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF7Q8N684 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF7Q8N684 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPSF7Q8N684 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CPSF7Q8N684 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CPSF7Q8N684 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CPSF7Q8N684 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.47■□□□□ 0.87
CPSF7Q8N684 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPSF7Q8N684 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPSF7Q8N684 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.47■□□□□ 0.87
CPSF7Q8N684 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.47■□□□□ 0.87
CPSF7Q8N684 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.47■□□□□ 0.87
CPSF7Q8N684 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPSF7Q8N684 RNF165-205ENST00000588679 2904 ntBASIC20.47■□□□□ 0.87
CPSF7Q8N684 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CPSF7Q8N684 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPSF7Q8N684 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPSF7Q8N684 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPSF7Q8N684 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPSF7Q8N684 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF7Q8N684 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF7Q8N684 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF7Q8N684 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.46■□□□□ 0.87
CPSF7Q8N684 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF7Q8N684 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms