Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 LINC02228-203ENST00000641970 1355 ntBASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 AL049796.1-201ENST00000565336 1766 ntBASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 KRT87P-202ENST00000534226 1464 ntBASIC19.22■□□□□ 0.67
ZNF440Q8IYI8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF440Q8IYI8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF440Q8IYI8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF440Q8IYI8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF440Q8IYI8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ZNF440Q8IYI8 AC123595.1-201ENST00000440769 1046 ntBASIC19.21■□□□□ 0.67
ZNF440Q8IYI8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF440Q8IYI8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF440Q8IYI8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF440Q8IYI8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF440Q8IYI8 AC005229.4-201ENST00000610085 2198 ntBASIC19.21■□□□□ 0.67
ZNF440Q8IYI8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF440Q8IYI8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF440Q8IYI8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF440Q8IYI8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF440Q8IYI8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF440Q8IYI8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF440Q8IYI8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF440Q8IYI8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF440Q8IYI8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF440Q8IYI8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF440Q8IYI8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF440Q8IYI8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF440Q8IYI8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF440Q8IYI8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF440Q8IYI8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 POU5F1P4-201ENST00000413175 1085 ntBASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 AC008175.2-201ENST00000612840 297 ntBASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ZNF440Q8IYI8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF440Q8IYI8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
ZNF440Q8IYI8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF440Q8IYI8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF440Q8IYI8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ZNF440Q8IYI8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF440Q8IYI8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF440Q8IYI8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF440Q8IYI8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF440Q8IYI8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 AP004607.4-201ENST00000530158 1459 ntBASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 AF106564.1-201ENST00000607058 2553 ntBASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 YBX1P1-201ENST00000445822 960 ntBASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF440Q8IYI8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms