Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
DHX40Q8IX18 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
DHX40Q8IX18 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DHX40Q8IX18 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DHX40Q8IX18 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.38■■□□□ 1.33
DHX40Q8IX18 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
DHX40Q8IX18 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.38■■□□□ 1.33
DHX40Q8IX18 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.38■■□□□ 1.33
DHX40Q8IX18 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DHX40Q8IX18 AL391422.3-201ENST00000603791 2761 ntBASIC23.38■■□□□ 1.33
DHX40Q8IX18 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DHX40Q8IX18 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DHX40Q8IX18 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DHX40Q8IX18 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DHX40Q8IX18 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DHX40Q8IX18 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.37■■□□□ 1.33
DHX40Q8IX18 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
DHX40Q8IX18 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DHX40Q8IX18 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
DHX40Q8IX18 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.37■■□□□ 1.33
DHX40Q8IX18 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DHX40Q8IX18 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
DHX40Q8IX18 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DHX40Q8IX18 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.37■■□□□ 1.33
DHX40Q8IX18 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
DHX40Q8IX18 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
DHX40Q8IX18 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
DHX40Q8IX18 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.37■■□□□ 1.33
DHX40Q8IX18 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.37■■□□□ 1.33
DHX40Q8IX18 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DHX40Q8IX18 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DHX40Q8IX18 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DHX40Q8IX18 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DHX40Q8IX18 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DHX40Q8IX18 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DHX40Q8IX18 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DHX40Q8IX18 SERBP1P1-201ENST00000396021 1160 ntBASIC23.36■■□□□ 1.33
DHX40Q8IX18 SLC47A1P1-202ENST00000449666 945 ntBASIC23.36■■□□□ 1.33
DHX40Q8IX18 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.36■■□□□ 1.33
DHX40Q8IX18 AP005435.1-201ENST00000529293 1178 ntBASIC23.36■■□□□ 1.33
DHX40Q8IX18 AC092171.4-201ENST00000609130 632 ntBASIC23.36■■□□□ 1.33
DHX40Q8IX18 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.36■■□□□ 1.33
DHX40Q8IX18 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.36■■□□□ 1.33
DHX40Q8IX18 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DHX40Q8IX18 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
DHX40Q8IX18 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DHX40Q8IX18 AC027702.1-201ENST00000563810 1770 ntBASIC23.35■■□□□ 1.33
DHX40Q8IX18 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DHX40Q8IX18 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.35■■□□□ 1.33
DHX40Q8IX18 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.35■■□□□ 1.33
DHX40Q8IX18 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.35■■□□□ 1.33
DHX40Q8IX18 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
DHX40Q8IX18 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DHX40Q8IX18 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.35■■□□□ 1.33
DHX40Q8IX18 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
DHX40Q8IX18 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.35■■□□□ 1.33
DHX40Q8IX18 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
DHX40Q8IX18 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
DHX40Q8IX18 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
DHX40Q8IX18 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
DHX40Q8IX18 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.35■■□□□ 1.33
DHX40Q8IX18 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
DHX40Q8IX18 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.34■■□□□ 1.33
DHX40Q8IX18 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
DHX40Q8IX18 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
DHX40Q8IX18 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.34■■□□□ 1.33
DHX40Q8IX18 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
DHX40Q8IX18 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.34■■□□□ 1.33
DHX40Q8IX18 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.34■■□□□ 1.33
DHX40Q8IX18 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.34■■□□□ 1.33
DHX40Q8IX18 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
DHX40Q8IX18 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
DHX40Q8IX18 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
DHX40Q8IX18 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
DHX40Q8IX18 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.33■■□□□ 1.33
DHX40Q8IX18 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
DHX40Q8IX18 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.33■■□□□ 1.33
DHX40Q8IX18 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DHX40Q8IX18 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
DHX40Q8IX18 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.33■■□□□ 1.33
DHX40Q8IX18 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
DHX40Q8IX18 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
DHX40Q8IX18 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.32■■□□□ 1.32
DHX40Q8IX18 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.32■■□□□ 1.32
DHX40Q8IX18 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
DHX40Q8IX18 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.32■■□□□ 1.32
DHX40Q8IX18 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
DHX40Q8IX18 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DHX40Q8IX18 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
DHX40Q8IX18 MIR935-201ENST00000401179 91 ntBASIC23.32■■□□□ 1.32
DHX40Q8IX18 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
DHX40Q8IX18 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DHX40Q8IX18 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.32■■□□□ 1.32
DHX40Q8IX18 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
DHX40Q8IX18 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.31■■□□□ 1.32
DHX40Q8IX18 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DHX40Q8IX18 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DHX40Q8IX18 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
DHX40Q8IX18 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.31■■□□□ 1.32
DHX40Q8IX18 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms