Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
MRPL54Q6P161 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.86■□□□□ 0.13
MRPL54Q6P161 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.86■□□□□ 0.13
MRPL54Q6P161 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.86■□□□□ 0.13
MRPL54Q6P161 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
MRPL54Q6P161 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
MRPL54Q6P161 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.86■□□□□ 0.13
MRPL54Q6P161 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
MRPL54Q6P161 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
MRPL54Q6P161 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
MRPL54Q6P161 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
MRPL54Q6P161 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
MRPL54Q6P161 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL54Q6P161 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL54Q6P161 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.85■□□□□ 0.13
MRPL54Q6P161 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.85■□□□□ 0.13
MRPL54Q6P161 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL54Q6P161 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.85■□□□□ 0.13
MRPL54Q6P161 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL54Q6P161 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL54Q6P161 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL54Q6P161 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL54Q6P161 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
MRPL54Q6P161 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
MRPL54Q6P161 MIR6765-201ENST00000614092 87 ntBASIC15.85■□□□□ 0.13
MRPL54Q6P161 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL54Q6P161 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
MRPL54Q6P161 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL54Q6P161 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL54Q6P161 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.85■□□□□ 0.13
MRPL54Q6P161 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.85■□□□□ 0.13
MRPL54Q6P161 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL54Q6P161 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.84■□□□□ 0.13
MRPL54Q6P161 C17orf82-201ENST00000623772 1530 ntBASIC15.84■□□□□ 0.13
MRPL54Q6P161 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.84■□□□□ 0.13
MRPL54Q6P161 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL54Q6P161 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL54Q6P161 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
MRPL54Q6P161 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC15.84■□□□□ 0.13
MRPL54Q6P161 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL54Q6P161 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL54Q6P161 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL54Q6P161 FP325331.1-202ENST00000623531 1380 ntBASIC15.84■□□□□ 0.13
MRPL54Q6P161 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL54Q6P161 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL54Q6P161 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
MRPL54Q6P161 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.84■□□□□ 0.13
MRPL54Q6P161 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
MRPL54Q6P161 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL54Q6P161 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MRPL54Q6P161 AF131216.4-201ENST00000638924 1588 ntBASIC15.83■□□□□ 0.13
MRPL54Q6P161 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MRPL54Q6P161 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MRPL54Q6P161 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MRPL54Q6P161 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
MRPL54Q6P161 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL54Q6P161 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL54Q6P161 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL54Q6P161 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
MRPL54Q6P161 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.83■□□□□ 0.12
MRPL54Q6P161 SRP68-213ENST00000629930 165 ntTSL 5 BASIC15.83■□□□□ 0.12
MRPL54Q6P161 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL54Q6P161 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL54Q6P161 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL54Q6P161 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL54Q6P161 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL54Q6P161 AC020763.4-201ENST00000623414 4170 ntBASIC15.83■□□□□ 0.12
MRPL54Q6P161 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL54Q6P161 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL54Q6P161 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL54Q6P161 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL54Q6P161 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL54Q6P161 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL54Q6P161 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL54Q6P161 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
MRPL54Q6P161 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
MRPL54Q6P161 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MRPL54Q6P161 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL54Q6P161 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL54Q6P161 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL54Q6P161 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL54Q6P161 HES4-202ENST00000428771 1040 ntTSL 2 BASIC15.82■□□□□ 0.12
MRPL54Q6P161 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.82■□□□□ 0.12
MRPL54Q6P161 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
MRPL54Q6P161 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC15.82■□□□□ 0.12
MRPL54Q6P161 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL54Q6P161 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms