Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 SNX5-217ENST00000606557 1087 ntBASIC19.81■□□□□ 0.76
LPCAT4Q643R3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
LPCAT4Q643R3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.8■□□□□ 0.76
LPCAT4Q643R3 AC020907.5-201ENST00000624372 1936 ntBASIC19.8■□□□□ 0.76
LPCAT4Q643R3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 AC079089.2-201ENST00000531211 1277 ntBASIC19.79■□□□□ 0.76
LPCAT4Q643R3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LPCAT4Q643R3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.78■□□□□ 0.76
LPCAT4Q643R3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 AC116562.4-201ENST00000641316 2276 ntBASIC19.77■□□□□ 0.76
LPCAT4Q643R3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LPCAT4Q643R3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
LPCAT4Q643R3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
LPCAT4Q643R3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LPCAT4Q643R3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms