Protein–RNA interactions for Protein: Q5EBM4

ZNF542P, Putative zinc finger protein 542, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF542PQ5EBM4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF542PQ5EBM4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.64■□□□□ 0.9
ZNF542PQ5EBM4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.64■□□□□ 0.9
ZNF542PQ5EBM4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF542PQ5EBM4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF542PQ5EBM4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 RNA5SP413-201ENST00000516373 109 ntBASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 AL591742.1-201ENST00000604433 565 ntBASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
ZNF542PQ5EBM4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 FAM99A-202ENST00000538190 1989 ntBASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 AL512625.2-201ENST00000417533 625 ntBASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ZNF542PQ5EBM4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ZNF542PQ5EBM4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF542PQ5EBM4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF542PQ5EBM4 C11orf96-202ENST00000528572 1834 ntBASIC20.62■□□□□ 0.89
ZNF542PQ5EBM4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF542PQ5EBM4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF542PQ5EBM4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ZNF542PQ5EBM4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF542PQ5EBM4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF542PQ5EBM4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
ZNF542PQ5EBM4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF542PQ5EBM4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF542PQ5EBM4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF542PQ5EBM4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF542PQ5EBM4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 FAM201B-201ENST00000458407 597 ntBASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF542PQ5EBM4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.6■□□□□ 0.89
ZNF542PQ5EBM4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ZNF542PQ5EBM4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF542PQ5EBM4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF542PQ5EBM4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF542PQ5EBM4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF542PQ5EBM4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.6■□□□□ 0.89
ZNF542PQ5EBM4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF542PQ5EBM4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF542PQ5EBM4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF542PQ5EBM4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF542PQ5EBM4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF542PQ5EBM4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNF542PQ5EBM4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNF542PQ5EBM4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF542PQ5EBM4 RARRES2P4-201ENST00000514074 484 ntBASIC20.59■□□□□ 0.89
ZNF542PQ5EBM4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF542PQ5EBM4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.59■□□□□ 0.89
ZNF542PQ5EBM4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms