Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC133637.1-201ENST00000624115 1537 ntBASIC14.83□□□□□ -0.04
RPL39P62891 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.83□□□□□ -0.04
RPL39P62891 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL39P62891 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPL39P62891 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL39P62891 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPL39P62891 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL39P62891 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RPL39P62891 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.83□□□□□ -0.04
RPL39P62891 AL451085.2-201ENST00000605085 799 ntBASIC14.83□□□□□ -0.04
RPL39P62891 AC092028.1-203ENST00000608262 953 ntBASIC14.83□□□□□ -0.04
RPL39P62891 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL39P62891 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL39P62891 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RPL39P62891 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL39P62891 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL39P62891 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RPL39P62891 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.83□□□□□ -0.04
RPL39P62891 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPL39P62891 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.83□□□□□ -0.04
RPL39P62891 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL39P62891 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL39P62891 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
RPL39P62891 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL39P62891 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPL39P62891 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.82□□□□□ -0.04
RPL39P62891 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL39P62891 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPL39P62891 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.82□□□□□ -0.04
RPL39P62891 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL39P62891 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL39P62891 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL39P62891 AC006128.1-201ENST00000624704 1661 ntBASIC14.82□□□□□ -0.04
RPL39P62891 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RPL39P62891 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL39P62891 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.82□□□□□ -0.04
RPL39P62891 AL033527.3-201ENST00000566366 1196 ntBASIC14.82□□□□□ -0.04
RPL39P62891 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL39P62891 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RPL39P62891 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL39P62891 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RPL39P62891 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL39P62891 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
RPL39P62891 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL39P62891 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RPL39P62891 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RPL39P62891 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPL39P62891 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.82□□□□□ -0.04
RPL39P62891 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL39P62891 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RPL39P62891 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.82□□□□□ -0.04
RPL39P62891 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RPL39P62891 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.81□□□□□ -0.04
RPL39P62891 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RPL39P62891 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
RPL39P62891 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
RPL39P62891 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RPL39P62891 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.81□□□□□ -0.04
RPL39P62891 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 TFPT-201ENST00000391757 774 ntTSL 5 BASIC14.81□□□□□ -0.04
RPL39P62891 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.81□□□□□ -0.04
RPL39P62891 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.81□□□□□ -0.04
RPL39P62891 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.81□□□□□ -0.04
RPL39P62891 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
RPL39P62891 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.81□□□□□ -0.04
RPL39P62891 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RPL39P62891 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL39P62891 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.81□□□□□ -0.04
RPL39P62891 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.81□□□□□ -0.04
RPL39P62891 AC003102.1-202ENST00000563394 1796 ntBASIC14.8□□□□□ -0.04
RPL39P62891 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPL39P62891 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RPL39P62891 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.8□□□□□ -0.04
RPL39P62891 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RPL39P62891 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RPL39P62891 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RPL39P62891 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.8□□□□□ -0.04
RPL39P62891 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPL39P62891 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RPL39P62891 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC14.8□□□□□ -0.04
RPL39P62891 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPL39P62891 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms