Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
RPS3AP61247 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.58■□□□□ 0.73
RPS3AP61247 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPS3AP61247 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.58■□□□□ 0.72
RPS3AP61247 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPS3AP61247 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.58■□□□□ 0.72
RPS3AP61247 AC012414.1-201ENST00000556676 535 ntBASIC19.58■□□□□ 0.72
RPS3AP61247 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPS3AP61247 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPS3AP61247 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.58■□□□□ 0.72
RPS3AP61247 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.58■□□□□ 0.72
RPS3AP61247 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPS3AP61247 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
RPS3AP61247 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPS3AP61247 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS3AP61247 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS3AP61247 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS3AP61247 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.57■□□□□ 0.72
RPS3AP61247 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS3AP61247 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS3AP61247 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS3AP61247 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RPS3AP61247 RARRES2P6-201ENST00000567333 442 ntBASIC19.57■□□□□ 0.72
RPS3AP61247 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.57■□□□□ 0.72
RPS3AP61247 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RPS3AP61247 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS3AP61247 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.57■□□□□ 0.72
RPS3AP61247 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPS3AP61247 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
RPS3AP61247 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS3AP61247 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS3AP61247 OXCT2P1-201ENST00000447263 1535 ntBASIC19.56■□□□□ 0.72
RPS3AP61247 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS3AP61247 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS3AP61247 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.56■□□□□ 0.72
RPS3AP61247 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS3AP61247 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.56■□□□□ 0.72
RPS3AP61247 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.56■□□□□ 0.72
RPS3AP61247 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RPS3AP61247 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.56■□□□□ 0.72
RPS3AP61247 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.56■□□□□ 0.72
RPS3AP61247 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS3AP61247 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS3AP61247 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.56■□□□□ 0.72
RPS3AP61247 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS3AP61247 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS3AP61247 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPS3AP61247 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS3AP61247 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPS3AP61247 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RPS3AP61247 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS3AP61247 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
RPS3AP61247 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPS3AP61247 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RPS3AP61247 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS3AP61247 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS3AP61247 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.55■□□□□ 0.72
RPS3AP61247 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.55■□□□□ 0.72
RPS3AP61247 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.55■□□□□ 0.72
RPS3AP61247 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS3AP61247 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPS3AP61247 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.55■□□□□ 0.72
RPS3AP61247 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS3AP61247 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.55■□□□□ 0.72
RPS3AP61247 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.54■□□□□ 0.72
RPS3AP61247 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS3AP61247 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS3AP61247 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.54■□□□□ 0.72
RPS3AP61247 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS3AP61247 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.54■□□□□ 0.72
RPS3AP61247 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS3AP61247 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS3AP61247 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.54■□□□□ 0.72
RPS3AP61247 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS3AP61247 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.54■□□□□ 0.72
RPS3AP61247 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RPS3AP61247 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.54■□□□□ 0.72
RPS3AP61247 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPS3AP61247 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS3AP61247 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPS3AP61247 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS3AP61247 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS3AP61247 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS3AP61247 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS3AP61247 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.53■□□□□ 0.72
RPS3AP61247 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.53■□□□□ 0.72
RPS3AP61247 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.53■□□□□ 0.72
RPS3AP61247 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.53■□□□□ 0.72
RPS3AP61247 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPS3AP61247 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RPS3AP61247 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS3AP61247 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS3AP61247 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPS3AP61247 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS3AP61247 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS3AP61247 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.53■□□□□ 0.72
RPS3AP61247 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
RPS3AP61247 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.53■□□□□ 0.72
RPS3AP61247 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
RPS3AP61247 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms