Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.29■□□□□ 0.84
EPHA4P54764 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.29■□□□□ 0.84
EPHA4P54764 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.29■□□□□ 0.84
EPHA4P54764 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.29■□□□□ 0.84
EPHA4P54764 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.29■□□□□ 0.84
EPHA4P54764 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.29■□□□□ 0.84
EPHA4P54764 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA4P54764 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA4P54764 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA4P54764 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
EPHA4P54764 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA4P54764 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
EPHA4P54764 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA4P54764 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA4P54764 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA4P54764 AL512625.2-201ENST00000417533 625 ntBASIC20.28■□□□□ 0.84
EPHA4P54764 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA4P54764 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.28■□□□□ 0.84
EPHA4P54764 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA4P54764 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.28■□□□□ 0.84
EPHA4P54764 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA4P54764 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA4P54764 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
EPHA4P54764 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHA4P54764 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHA4P54764 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EPHA4P54764 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHA4P54764 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHA4P54764 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
EPHA4P54764 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHA4P54764 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EPHA4P54764 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
EPHA4P54764 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.27■□□□□ 0.84
EPHA4P54764 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHA4P54764 AC073210.2-201ENST00000430369 194 ntBASIC20.27■□□□□ 0.84
EPHA4P54764 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.27■□□□□ 0.84
EPHA4P54764 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
EPHA4P54764 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.27■□□□□ 0.84
EPHA4P54764 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EPHA4P54764 AL591742.1-201ENST00000604433 565 ntBASIC20.27■□□□□ 0.84
EPHA4P54764 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHA4P54764 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.27■□□□□ 0.84
EPHA4P54764 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHA4P54764 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.27■□□□□ 0.84
EPHA4P54764 AC242852.2-201ENST00000615738 1807 ntBASIC20.27■□□□□ 0.84
EPHA4P54764 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
EPHA4P54764 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA4P54764 AC026471.6-201ENST00000622954 1905 ntBASIC20.26■□□□□ 0.83
EPHA4P54764 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA4P54764 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA4P54764 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA4P54764 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
EPHA4P54764 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.26■□□□□ 0.83
EPHA4P54764 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.26■□□□□ 0.83
EPHA4P54764 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.26■□□□□ 0.83
EPHA4P54764 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.26■□□□□ 0.83
EPHA4P54764 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.26■□□□□ 0.83
EPHA4P54764 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.26■□□□□ 0.83
EPHA4P54764 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
EPHA4P54764 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA4P54764 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
EPHA4P54764 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA4P54764 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA4P54764 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
EPHA4P54764 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA4P54764 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.25■□□□□ 0.83
EPHA4P54764 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA4P54764 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA4P54764 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA4P54764 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.25■□□□□ 0.83
EPHA4P54764 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA4P54764 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA4P54764 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.25■□□□□ 0.83
EPHA4P54764 AL138781.1-201ENST00000566567 1274 ntBASIC20.25■□□□□ 0.83
EPHA4P54764 AC133041.1-202ENST00000642053 222 ntBASIC20.25■□□□□ 0.83
EPHA4P54764 AC010542.4-201ENST00000563151 1910 ntBASIC20.25■□□□□ 0.83
EPHA4P54764 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.25■□□□□ 0.83
EPHA4P54764 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA4P54764 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHA4P54764 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
EPHA4P54764 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA4P54764 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA4P54764 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.24■□□□□ 0.83
EPHA4P54764 MKRN4P-201ENST00000444706 1521 ntBASIC20.24■□□□□ 0.83
EPHA4P54764 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA4P54764 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA4P54764 AC069152.1-201ENST00000438030 544 ntBASIC20.24■□□□□ 0.83
EPHA4P54764 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.24■□□□□ 0.83
EPHA4P54764 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.24■□□□□ 0.83
EPHA4P54764 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.24■□□□□ 0.83
EPHA4P54764 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
EPHA4P54764 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA4P54764 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EPHA4P54764 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
EPHA4P54764 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.24■□□□□ 0.83
EPHA4P54764 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHA4P54764 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
EPHA4P54764 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHA4P54764 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHA4P54764 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms