Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.73■□□□□ 0.75
EFNA3P52797 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.73■□□□□ 0.75
EFNA3P52797 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.73■□□□□ 0.75
EFNA3P52797 HLA-L-209ENST00000420110 1011 ntBASIC19.73■□□□□ 0.75
EFNA3P52797 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EFNA3P52797 SLC7A5P1-201ENST00000568957 537 ntBASIC19.73■□□□□ 0.75
EFNA3P52797 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.73■□□□□ 0.75
EFNA3P52797 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.73■□□□□ 0.75
EFNA3P52797 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
EFNA3P52797 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.73■□□□□ 0.75
EFNA3P52797 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
EFNA3P52797 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
EFNA3P52797 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EFNA3P52797 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFNA3P52797 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFNA3P52797 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EFNA3P52797 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFNA3P52797 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.72■□□□□ 0.75
EFNA3P52797 ID1-201ENST00000376105 1233 ntBASIC19.72■□□□□ 0.75
EFNA3P52797 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.72■□□□□ 0.75
EFNA3P52797 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.72■□□□□ 0.75
EFNA3P52797 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.72■□□□□ 0.75
EFNA3P52797 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EFNA3P52797 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EFNA3P52797 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.72■□□□□ 0.75
EFNA3P52797 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFNA3P52797 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
EFNA3P52797 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFNA3P52797 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
EFNA3P52797 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.72■□□□□ 0.75
EFNA3P52797 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EFNA3P52797 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EFNA3P52797 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
EFNA3P52797 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.71■□□□□ 0.75
EFNA3P52797 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.71■□□□□ 0.75
EFNA3P52797 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNA3P52797 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNA3P52797 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
EFNA3P52797 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.71■□□□□ 0.75
EFNA3P52797 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNA3P52797 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EFNA3P52797 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
EFNA3P52797 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EFNA3P52797 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.71■□□□□ 0.75
EFNA3P52797 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.71■□□□□ 0.75
EFNA3P52797 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.71■□□□□ 0.75
EFNA3P52797 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNA3P52797 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.71■□□□□ 0.75
EFNA3P52797 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNA3P52797 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFNA3P52797 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
EFNA3P52797 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.71■□□□□ 0.75
EFNA3P52797 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFNA3P52797 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFNA3P52797 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFNA3P52797 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFNA3P52797 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.7■□□□□ 0.74
EFNA3P52797 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
EFNA3P52797 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFNA3P52797 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFNA3P52797 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
EFNA3P52797 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFNA3P52797 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFNA3P52797 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.7■□□□□ 0.74
EFNA3P52797 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.7■□□□□ 0.74
EFNA3P52797 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.7■□□□□ 0.74
EFNA3P52797 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.7■□□□□ 0.74
EFNA3P52797 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
EFNA3P52797 AC008175.2-201ENST00000612840 297 ntBASIC19.7■□□□□ 0.74
EFNA3P52797 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.7■□□□□ 0.74
EFNA3P52797 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFNA3P52797 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.7■□□□□ 0.74
EFNA3P52797 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.7■□□□□ 0.74
EFNA3P52797 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.7■□□□□ 0.74
EFNA3P52797 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFNA3P52797 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFNA3P52797 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFNA3P52797 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
EFNA3P52797 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFNA3P52797 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.7■□□□□ 0.74
EFNA3P52797 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFNA3P52797 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
EFNA3P52797 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EFNA3P52797 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFNA3P52797 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
EFNA3P52797 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EFNA3P52797 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EFNA3P52797 POU5F1P4-201ENST00000413175 1085 ntBASIC19.69■□□□□ 0.74
EFNA3P52797 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.69■□□□□ 0.74
EFNA3P52797 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
EFNA3P52797 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.69■□□□□ 0.74
EFNA3P52797 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
EFNA3P52797 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
EFNA3P52797 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.69■□□□□ 0.74
EFNA3P52797 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.69■□□□□ 0.74
EFNA3P52797 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
EFNA3P52797 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.69■□□□□ 0.74
EFNA3P52797 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.69■□□□□ 0.74
EFNA3P52797 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFNA3P52797 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms