Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF144AP50876 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF144AP50876 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RNF144AP50876 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF144AP50876 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF144AP50876 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF144AP50876 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
RNF144AP50876 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF144AP50876 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF144AP50876 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF144AP50876 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF144AP50876 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF144AP50876 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF144AP50876 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF144AP50876 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF144AP50876 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF144AP50876 TPRG1LP1-201ENST00000598702 760 ntBASIC19.48■□□□□ 0.71
RNF144AP50876 AL358852.1-201ENST00000623174 1268 ntBASIC19.48■□□□□ 0.71
RNF144AP50876 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF144AP50876 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF144AP50876 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF144AP50876 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF144AP50876 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF144AP50876 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF144AP50876 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF144AP50876 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF144AP50876 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RNF144AP50876 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF144AP50876 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF144AP50876 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF144AP50876 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF144AP50876 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF144AP50876 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF144AP50876 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF144AP50876 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF144AP50876 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF144AP50876 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF144AP50876 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF144AP50876 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF144AP50876 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF144AP50876 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF144AP50876 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RNF144AP50876 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF144AP50876 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF144AP50876 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF144AP50876 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF144AP50876 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF144AP50876 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF144AP50876 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RNF144AP50876 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF144AP50876 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF144AP50876 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF144AP50876 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF144AP50876 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF144AP50876 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF144AP50876 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF144AP50876 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF144AP50876 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF144AP50876 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RNF144AP50876 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF144AP50876 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF144AP50876 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF144AP50876 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF144AP50876 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF144AP50876 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF144AP50876 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF144AP50876 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RNF144AP50876 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RNF144AP50876 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RNF144AP50876 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RNF144AP50876 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF144AP50876 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.44■□□□□ 0.7
RNF144AP50876 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF144AP50876 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF144AP50876 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF144AP50876 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RNF144AP50876 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF144AP50876 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF144AP50876 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF144AP50876 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF144AP50876 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF144AP50876 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
RNF144AP50876 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF144AP50876 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF144AP50876 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF144AP50876 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF144AP50876 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF144AP50876 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF144AP50876 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF144AP50876 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RNF144AP50876 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF144AP50876 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF144AP50876 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RNF144AP50876 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RNF144AP50876 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
RNF144AP50876 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF144AP50876 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF144AP50876 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF144AP50876 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF144AP50876 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms