Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SLC9A3P48764 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC9A3P48764 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC9A3P48764 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC9A3P48764 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC9A3P48764 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC9A3P48764 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC9A3P48764 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC9A3P48764 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SLC9A3P48764 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC9A3P48764 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SLC9A3P48764 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC9A3P48764 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC9A3P48764 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC9A3P48764 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SLC9A3P48764 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC9A3P48764 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SLC9A3P48764 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SLC9A3P48764 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC9A3P48764 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC9A3P48764 SMUG1P1-201ENST00000590640 811 ntBASIC19.18■□□□□ 0.66
SLC9A3P48764 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC9A3P48764 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC9A3P48764 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SLC9A3P48764 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
SLC9A3P48764 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC9A3P48764 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC9A3P48764 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SLC9A3P48764 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC9A3P48764 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC9A3P48764 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC9A3P48764 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC9A3P48764 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC9A3P48764 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC9A3P48764 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC9A3P48764 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC9A3P48764 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.17■□□□□ 0.66
SLC9A3P48764 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.17■□□□□ 0.66
SLC9A3P48764 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SLC9A3P48764 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC9A3P48764 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC9A3P48764 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC9A3P48764 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC9A3P48764 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC9A3P48764 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SLC9A3P48764 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC9A3P48764 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC9A3P48764 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC9A3P48764 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 AC024257.2-201ENST00000549699 147 ntBASIC19.16■□□□□ 0.66
SLC9A3P48764 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC9A3P48764 AL136162.1-201ENST00000607711 1078 ntBASIC19.16■□□□□ 0.66
SLC9A3P48764 AC131212.1-201ENST00000613771 668 ntBASIC19.16■□□□□ 0.66
SLC9A3P48764 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
SLC9A3P48764 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
SLC9A3P48764 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC9A3P48764 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLC9A3P48764 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC9A3P48764 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC9A3P48764 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
SLC9A3P48764 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC9A3P48764 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC9A3P48764 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC9A3P48764 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC9A3P48764 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC9A3P48764 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC9A3P48764 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC9A3P48764 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC9A3P48764 IGHV3-19-201ENST00000521488 291 ntBASIC19.15■□□□□ 0.66
SLC9A3P48764 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC9A3P48764 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC9A3P48764 AC126544.1-201ENST00000580842 1059 ntBASIC19.15■□□□□ 0.66
SLC9A3P48764 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
SLC9A3P48764 AC135279.3-201ENST00000610945 1311 ntBASIC19.15■□□□□ 0.66
SLC9A3P48764 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC9A3P48764 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC9A3P48764 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC9A3P48764 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC9A3P48764 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC9A3P48764 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC9A3P48764 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC9A3P48764 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
SLC9A3P48764 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC9A3P48764 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC9A3P48764 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC9A3P48764 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms