Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.24■□□□□ 0.51
GDNFP39905 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GDNFP39905 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.24■□□□□ 0.51
GDNFP39905 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.24■□□□□ 0.51
GDNFP39905 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GDNFP39905 AC099791.2-201ENST00000605725 427 ntBASIC18.24■□□□□ 0.51
GDNFP39905 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.24■□□□□ 0.51
GDNFP39905 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
GDNFP39905 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.24■□□□□ 0.51
GDNFP39905 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
GDNFP39905 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GDNFP39905 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.24■□□□□ 0.51
GDNFP39905 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.24■□□□□ 0.51
GDNFP39905 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.24■□□□□ 0.51
GDNFP39905 AL049796.1-201ENST00000565336 1766 ntBASIC18.24■□□□□ 0.51
GDNFP39905 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GDNFP39905 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
GDNFP39905 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
GDNFP39905 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
GDNFP39905 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.23■□□□□ 0.51
GDNFP39905 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
GDNFP39905 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GDNFP39905 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
GDNFP39905 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
GDNFP39905 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDNFP39905 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GDNFP39905 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.23■□□□□ 0.51
GDNFP39905 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
GDNFP39905 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GDNFP39905 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDNFP39905 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDNFP39905 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDNFP39905 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GDNFP39905 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.23■□□□□ 0.51
GDNFP39905 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GDNFP39905 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDNFP39905 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.22■□□□□ 0.51
GDNFP39905 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.22■□□□□ 0.51
GDNFP39905 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.22■□□□□ 0.51
GDNFP39905 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GDNFP39905 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDNFP39905 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDNFP39905 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.22■□□□□ 0.51
GDNFP39905 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDNFP39905 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.22■□□□□ 0.51
GDNFP39905 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.22■□□□□ 0.51
GDNFP39905 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDNFP39905 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.22■□□□□ 0.51
GDNFP39905 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.22■□□□□ 0.51
GDNFP39905 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
GDNFP39905 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.22■□□□□ 0.51
GDNFP39905 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.22■□□□□ 0.51
GDNFP39905 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDNFP39905 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GDNFP39905 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.21■□□□□ 0.51
GDNFP39905 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDNFP39905 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
GDNFP39905 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
GDNFP39905 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.21■□□□□ 0.51
GDNFP39905 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDNFP39905 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDNFP39905 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.21■□□□□ 0.51
GDNFP39905 AP005212.1-201ENST00000581547 1997 ntBASIC18.21■□□□□ 0.51
GDNFP39905 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDNFP39905 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
GDNFP39905 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDNFP39905 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDNFP39905 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
GDNFP39905 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.21■□□□□ 0.51
GDNFP39905 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.21■□□□□ 0.51
GDNFP39905 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.21■□□□□ 0.51
GDNFP39905 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDNFP39905 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
GDNFP39905 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDNFP39905 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDNFP39905 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDNFP39905 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
GDNFP39905 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDNFP39905 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
GDNFP39905 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.21■□□□□ 0.51
GDNFP39905 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
GDNFP39905 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
GDNFP39905 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDNFP39905 AFG3L1P-217ENST00000557444 2447 ntBASIC18.2■□□□□ 0.5
GDNFP39905 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDNFP39905 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDNFP39905 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDNFP39905 SRD5A1P1-201ENST00000442297 786 ntBASIC18.2■□□□□ 0.5
GDNFP39905 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GDNFP39905 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDNFP39905 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.2■□□□□ 0.5
GDNFP39905 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.2■□□□□ 0.5
GDNFP39905 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDNFP39905 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDNFP39905 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDNFP39905 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDNFP39905 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.19■□□□□ 0.5
GDNFP39905 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
GDNFP39905 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.19■□□□□ 0.5
GDNFP39905 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms