Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 RRN7YJL025W 1545 nt5.02□□□□□ -1.61
SSF1P38789 SKO1YNL167C 1944 nt5.01□□□□□ -1.61
SSF1P38789 TDA7YNL176C 1911 nt5.01□□□□□ -1.61
SSF1P38789 SNU56YDR240C 1479 nt5.01□□□□□ -1.61
SSF1P38789 TIF4632YGL049C 2745 nt5.01□□□□□ -1.61
SSF1P38789 YDR115WYDR115W 318 nt5.01□□□□□ -1.61
SSF1P38789 YBL028CYBL028C 321 nt5.01□□□□□ -1.61
SSF1P38789 ERG2YMR202W 669 nt5.01□□□□□ -1.61
SSF1P38789 GCY1YOR120W 939 nt5.01□□□□□ -1.61
SSF1P38789 AFT2YPL202C 1251 nt5.01□□□□□ -1.61
SSF1P38789 GPI1YGR216C 1830 nt5.01□□□□□ -1.61
SSF1P38789 PEP7YDR323C 1548 nt5.01□□□□□ -1.61
SSF1P38789 15S_rRNA15S_rRNA 1649 nt5.01□□□□□ -1.61
SSF1P38789 ISM1YPL040C 3009 nt5□□□□□ -1.61
SSF1P38789 RPS18AYDR450W 441 nt5□□□□□ -1.61
SSF1P38789 YGL039WYGL039W 1047 nt5□□□□□ -1.61
SSF1P38789 YHR212W-AYHR212W-A 204 nt5□□□□□ -1.61
SSF1P38789 ACF4YJR083C 930 nt5□□□□□ -1.61
SSF1P38789 SDH3YKL141W 597 nt5□□□□□ -1.61
SSF1P38789 RDN5-1RDN5-1 121 nt5□□□□□ -1.61
SSF1P38789 ENV10YLR065C 546 nt5□□□□□ -1.61
SSF1P38789 YAR061WYAR061W 204 nt5□□□□□ -1.61
SSF1P38789 RDN5-6RDN5-6 121 nt5□□□□□ -1.61
SSF1P38789 ASI2YNL159C 870 nt5□□□□□ -1.61
SSF1P38789 SWC4YGR002C 1431 nt4.99□□□□□ -1.61
SSF1P38789 PEX6YNL329C 3093 nt4.99□□□□□ -1.61
SSF1P38789 VHC1YBR235W 3363 nt4.99□□□□□ -1.61
SSF1P38789 YDR262WYDR262W 819 nt4.99□□□□□ -1.61
SSF1P38789 MRM2YGL136C 963 nt4.99□□□□□ -1.61
SSF1P38789 YLR297WYLR297W 390 nt4.99□□□□□ -1.61
SSF1P38789 YMR001C-AYMR001C-A 231 nt4.99□□□□□ -1.61
SSF1P38789 YMR173W-AYMR173W-A 1185 nt4.99□□□□□ -1.61
SSF1P38789 TPK2YPL203W 1143 nt4.99□□□□□ -1.61
SSF1P38789 RPC40YPR110C 1008 nt4.99□□□□□ -1.61
SSF1P38789 IRC3YDR332W 2070 nt4.99□□□□□ -1.61
SSF1P38789 YDR261C-DYDR261C-D 4815 nt4.99□□□□□ -1.61
SSF1P38789 THI20YOL055C 1656 nt4.99□□□□□ -1.61
SSF1P38789 VBA2YBR293W 1425 nt4.98□□□□□ -1.61
SSF1P38789 YNR065CYNR065C 3351 nt4.98□□□□□ -1.61
SSF1P38789 THI13YDL244W 1023 nt4.98□□□□□ -1.61
SSF1P38789 YER119C-AYER119C-A 372 nt4.98□□□□□ -1.61
SSF1P38789 AGA2YGL032C 264 nt4.98□□□□□ -1.61
SSF1P38789 COX2Q0250 756 nt4.98□□□□□ -1.61
SSF1P38789 FUR1YHR128W 651 nt4.98□□□□□ -1.61
SSF1P38789 YKT6YKL196C 603 nt4.98□□□□□ -1.61
SSF1P38789 ARC18YLR370C 537 nt4.98□□□□□ -1.61
SSF1P38789 MRPL3YMR024W 1173 nt4.98□□□□□ -1.61
SSF1P38789 PBI2YNL015W 228 nt4.98□□□□□ -1.61
SSF1P38789 YNR021WYNR021W 1215 nt4.98□□□□□ -1.61
SSF1P38789 UBP16YPL072W 1500 nt4.97□□□□□ -1.61
SSF1P38789 TGL3YMR313C 1929 nt4.97□□□□□ -1.61
SSF1P38789 FRE4YNR060W 2160 nt4.97□□□□□ -1.61
SSF1P38789 YCR064CYCR064C 411 nt4.97□□□□□ -1.61
SSF1P38789 HNT1YDL125C 477 nt4.97□□□□□ -1.61
SSF1P38789 YDL228CYDL228C 642 nt4.97□□□□□ -1.61
SSF1P38789 CPR5YDR304C 678 nt4.97□□□□□ -1.61
SSF1P38789 BNA7YDR428C 786 nt4.97□□□□□ -1.61
SSF1P38789 VMA10YHR039C-A 345 nt4.97□□□□□ -1.61
SSF1P38789 CMS1YLR003C 876 nt4.97□□□□□ -1.61
SSF1P38789 YOR131CYOR131C 657 nt4.97□□□□□ -1.61
SSF1P38789 YBR103C-AYBR103C-A 144 nt4.97□□□□□ -1.61
SSF1P38789 YCR023CYCR023C 1836 nt4.97□□□□□ -1.61
SSF1P38789 RNT1YMR239C 1416 nt4.97□□□□□ -1.61
SSF1P38789 HOT1YMR172W 2160 nt4.97□□□□□ -1.61
SSF1P38789 YDR246W-AYDR246W-A 201 nt4.96□□□□□ -1.62
SSF1P38789 YGL108CYGL108C 423 nt4.96□□□□□ -1.62
SSF1P38789 PCL5YHR071W 690 nt4.96□□□□□ -1.62
SSF1P38789 YIL141WYIL141W 390 nt4.96□□□□□ -1.62
SSF1P38789 YLR224WYLR224W 1110 nt4.96□□□□□ -1.62
SSF1P38789 YNL089CYNL089C 477 nt4.96□□□□□ -1.62
SSF1P38789 TOM22YNL131W 459 nt4.96□□□□□ -1.62
SSF1P38789 ALG8YOR067C 1734 nt4.95□□□□□ -1.62
SSF1P38789 MTR10YOR160W 2919 nt4.95□□□□□ -1.62
SSF1P38789 CWC2YDL209C 1020 nt4.95□□□□□ -1.62
SSF1P38789 YHL009W-AYHL009W-A 1242 nt4.95□□□□□ -1.62
SSF1P38789 TDA8YAL064C-A 381 nt4.95□□□□□ -1.62
SSF1P38789 SDO1YLR022C 753 nt4.95□□□□□ -1.62
SSF1P38789 YBL039W-BYBL039W-B 180 nt4.95□□□□□ -1.62
SSF1P38789 RPS16AYMR143W 432 nt4.95□□□□□ -1.62
SSF1P38789 AAR2YBL074C 1068 nt4.95□□□□□ -1.62
SSF1P38789 SUI1YNL244C 327 nt4.95□□□□□ -1.62
SSF1P38789 SRL1YOR247W 633 nt4.95□□□□□ -1.62
SSF1P38789 SVS1YPL163C 783 nt4.95□□□□□ -1.62
SSF1P38789 YPR059CYPR059C 387 nt4.95□□□□□ -1.62
SSF1P38789 KIP3YGL216W 2418 nt4.95□□□□□ -1.62
SSF1P38789 CLF1YLR117C 2064 nt4.95□□□□□ -1.62
SSF1P38789 YSH1YLR277C 2340 nt4.94□□□□□ -1.62
SSF1P38789 YIL014C-AYIL014C-A 315 nt4.94□□□□□ -1.62
SSF1P38789 PBA1YLR199C 831 nt4.94□□□□□ -1.62
SSF1P38789 GPI15YNL038W 690 nt4.94□□□□□ -1.62
SSF1P38789 RPL18AYOL120C 561 nt4.94□□□□□ -1.62
SSF1P38789 IDH2YOR136W 1110 nt4.94□□□□□ -1.62
SSF1P38789 snR35snR35 204 nt4.94□□□□□ -1.62
SSF1P38789 MCD4YKL165C 2760 nt4.94□□□□□ -1.62
SSF1P38789 BRE5YNR051C 1548 nt4.93□□□□□ -1.62
SSF1P38789 snR59snR59 78 nt4.93□□□□□ -1.62
SSF1P38789 FMN1YDR236C 657 nt4.93□□□□□ -1.62
SSF1P38789 RPL34AYER056C-A 366 nt4.93□□□□□ -1.62
SSF1P38789 AFB1YLR040C 675 nt4.93□□□□□ -1.62
SSF1P38789 RIM9YMR063W 720 nt4.93□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms