Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SRMP19623 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRMP19623 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRMP19623 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.33■□□□□ 0.52
SRMP19623 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.33■□□□□ 0.52
SRMP19623 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SRMP19623 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRMP19623 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRMP19623 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRMP19623 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.32■□□□□ 0.52
SRMP19623 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRMP19623 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRMP19623 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SRMP19623 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
SRMP19623 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRMP19623 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.32■□□□□ 0.52
SRMP19623 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SRMP19623 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SRMP19623 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.31■□□□□ 0.52
SRMP19623 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRMP19623 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRMP19623 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRMP19623 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.31■□□□□ 0.52
SRMP19623 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRMP19623 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
SRMP19623 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRMP19623 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRMP19623 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRMP19623 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.31■□□□□ 0.52
SRMP19623 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRMP19623 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRMP19623 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SRMP19623 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRMP19623 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SRMP19623 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SRMP19623 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRMP19623 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.3■□□□□ 0.52
SRMP19623 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SRMP19623 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRMP19623 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.3■□□□□ 0.52
SRMP19623 AC007952.6-201ENST00000573168 2673 ntBASIC18.3■□□□□ 0.52
SRMP19623 AC003957.1-201ENST00000625108 2673 ntBASIC18.3■□□□□ 0.52
SRMP19623 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.3■□□□□ 0.52
SRMP19623 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRMP19623 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.3■□□□□ 0.52
SRMP19623 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SRMP19623 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
SRMP19623 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.3■□□□□ 0.52
SRMP19623 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.3■□□□□ 0.52
SRMP19623 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRMP19623 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRMP19623 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.3■□□□□ 0.52
SRMP19623 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.3■□□□□ 0.52
SRMP19623 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SRMP19623 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SRMP19623 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRMP19623 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.3■□□□□ 0.52
SRMP19623 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRMP19623 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRMP19623 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRMP19623 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.29■□□□□ 0.52
SRMP19623 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRMP19623 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.29■□□□□ 0.52
SRMP19623 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRMP19623 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRMP19623 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRMP19623 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SRMP19623 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.29■□□□□ 0.52
SRMP19623 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.29■□□□□ 0.52
SRMP19623 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SRMP19623 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRMP19623 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRMP19623 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.29■□□□□ 0.52
SRMP19623 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.29■□□□□ 0.52
SRMP19623 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRMP19623 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRMP19623 AL391422.3-201ENST00000603791 2761 ntBASIC18.29■□□□□ 0.52
SRMP19623 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRMP19623 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SRMP19623 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SRMP19623 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SRMP19623 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SRMP19623 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.28■□□□□ 0.52
SRMP19623 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.28■□□□□ 0.52
SRMP19623 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SRMP19623 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.28■□□□□ 0.52
SRMP19623 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRMP19623 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRMP19623 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRMP19623 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRMP19623 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.28■□□□□ 0.52
SRMP19623 AC010525.1-201ENST00000585559 441 ntBASIC18.28■□□□□ 0.52
SRMP19623 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRMP19623 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRMP19623 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.28■□□□□ 0.52
SRMP19623 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRMP19623 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRMP19623 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.28■□□□□ 0.52
SRMP19623 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.28■□□□□ 0.52
SRMP19623 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms