Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATF1P18846 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATF1P18846 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATF1P18846 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.42■□□□□ 0.54
ATF1P18846 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATF1P18846 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATF1P18846 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.42■□□□□ 0.54
ATF1P18846 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.42■□□□□ 0.54
ATF1P18846 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.42■□□□□ 0.54
ATF1P18846 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATF1P18846 MIR4466-201ENST00000606121 54 ntBASIC18.42■□□□□ 0.54
ATF1P18846 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.42■□□□□ 0.54
ATF1P18846 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATF1P18846 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATF1P18846 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATF1P18846 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATF1P18846 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.42■□□□□ 0.54
ATF1P18846 AP005212.1-201ENST00000581547 1997 ntBASIC18.42■□□□□ 0.54
ATF1P18846 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ATF1P18846 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATF1P18846 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATF1P18846 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF1P18846 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ATF1P18846 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATF1P18846 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF1P18846 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF1P18846 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATF1P18846 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF1P18846 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.41■□□□□ 0.54
ATF1P18846 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF1P18846 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATF1P18846 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF1P18846 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.41■□□□□ 0.54
ATF1P18846 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.41■□□□□ 0.54
ATF1P18846 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF1P18846 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF1P18846 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF1P18846 AC073314.1-201ENST00000568729 2216 ntBASIC18.41■□□□□ 0.54
ATF1P18846 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF1P18846 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATF1P18846 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATF1P18846 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATF1P18846 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATF1P18846 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.4■□□□□ 0.54
ATF1P18846 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.4■□□□□ 0.54
ATF1P18846 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.4■□□□□ 0.54
ATF1P18846 AL034346.1-201ENST00000568244 1277 ntBASIC18.4■□□□□ 0.54
ATF1P18846 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.4■□□□□ 0.54
ATF1P18846 AC136469.2-201ENST00000623944 1028 ntBASIC18.4■□□□□ 0.54
ATF1P18846 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATF1P18846 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATF1P18846 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.4■□□□□ 0.54
ATF1P18846 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATF1P18846 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.4■□□□□ 0.54
ATF1P18846 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.4■□□□□ 0.54
ATF1P18846 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ATF1P18846 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATF1P18846 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATF1P18846 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATF1P18846 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.39■□□□□ 0.53
ATF1P18846 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATF1P18846 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATF1P18846 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATF1P18846 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.39■□□□□ 0.53
ATF1P18846 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATF1P18846 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATF1P18846 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATF1P18846 AP005435.1-201ENST00000529293 1178 ntBASIC18.39■□□□□ 0.53
ATF1P18846 AC011298.3-201ENST00000615796 283 ntBASIC18.39■□□□□ 0.53
ATF1P18846 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
ATF1P18846 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
ATF1P18846 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.39■□□□□ 0.53
ATF1P18846 AL391422.3-201ENST00000603791 2761 ntBASIC18.39■□□□□ 0.53
ATF1P18846 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.39■□□□□ 0.53
ATF1P18846 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATF1P18846 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.39■□□□□ 0.53
ATF1P18846 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATF1P18846 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ATF1P18846 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ATF1P18846 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ATF1P18846 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATF1P18846 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.38■□□□□ 0.53
ATF1P18846 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ATF1P18846 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.38■□□□□ 0.53
ATF1P18846 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.38■□□□□ 0.53
ATF1P18846 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ATF1P18846 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.38■□□□□ 0.53
ATF1P18846 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ATF1P18846 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATF1P18846 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATF1P18846 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ATF1P18846 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.38■□□□□ 0.53
ATF1P18846 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATF1P18846 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATF1P18846 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATF1P18846 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
ATF1P18846 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATF1P18846 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATF1P18846 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATF1P18846 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms