Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
H2AFXP16104 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
H2AFXP16104 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
H2AFXP16104 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
H2AFXP16104 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
H2AFXP16104 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
H2AFXP16104 AC120024.1-201ENST00000562672 995 ntBASIC21.93■■□□□ 1.1
H2AFXP16104 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.93■■□□□ 1.1
H2AFXP16104 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.93■■□□□ 1.1
H2AFXP16104 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
H2AFXP16104 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
H2AFXP16104 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
H2AFXP16104 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
H2AFXP16104 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
H2AFXP16104 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
H2AFXP16104 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
H2AFXP16104 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.92■■□□□ 1.1
H2AFXP16104 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
H2AFXP16104 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
H2AFXP16104 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.92■■□□□ 1.1
H2AFXP16104 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
H2AFXP16104 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
H2AFXP16104 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.92■■□□□ 1.1
H2AFXP16104 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
H2AFXP16104 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
H2AFXP16104 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
H2AFXP16104 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
H2AFXP16104 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.92■■□□□ 1.1
H2AFXP16104 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
H2AFXP16104 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
H2AFXP16104 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
H2AFXP16104 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
H2AFXP16104 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.92■■□□□ 1.1
H2AFXP16104 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
H2AFXP16104 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
H2AFXP16104 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
H2AFXP16104 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.91■■□□□ 1.1
H2AFXP16104 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
H2AFXP16104 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
H2AFXP16104 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.91■■□□□ 1.1
H2AFXP16104 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.91■■□□□ 1.1
H2AFXP16104 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
H2AFXP16104 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
H2AFXP16104 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
H2AFXP16104 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
H2AFXP16104 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.9■■□□□ 1.1
H2AFXP16104 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
H2AFXP16104 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
H2AFXP16104 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
H2AFXP16104 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
H2AFXP16104 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.9■■□□□ 1.1
H2AFXP16104 DUX4L9-201ENST00000449051 1259 ntBASIC21.9■■□□□ 1.1
H2AFXP16104 MIR4281-201ENST00000580852 62 ntBASIC21.9■■□□□ 1.1
H2AFXP16104 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
H2AFXP16104 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
H2AFXP16104 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
H2AFXP16104 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
H2AFXP16104 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
H2AFXP16104 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
H2AFXP16104 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
H2AFXP16104 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
H2AFXP16104 OR7E47P-201ENST00000546390 1422 ntBASIC21.89■■□□□ 1.1
H2AFXP16104 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
H2AFXP16104 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
H2AFXP16104 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
H2AFXP16104 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
H2AFXP16104 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
H2AFXP16104 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
H2AFXP16104 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
H2AFXP16104 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
H2AFXP16104 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
H2AFXP16104 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
H2AFXP16104 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
H2AFXP16104 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.89■■□□□ 1.09
H2AFXP16104 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
H2AFXP16104 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.89■■□□□ 1.09
H2AFXP16104 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.89■■□□□ 1.09
H2AFXP16104 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
H2AFXP16104 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
H2AFXP16104 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.89■■□□□ 1.09
H2AFXP16104 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.89■■□□□ 1.09
H2AFXP16104 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
H2AFXP16104 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2AFXP16104 AC125437.2-201ENST00000625180 2167 ntBASIC21.88■■□□□ 1.09
H2AFXP16104 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
H2AFXP16104 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.88■■□□□ 1.09
H2AFXP16104 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2AFXP16104 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
H2AFXP16104 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2AFXP16104 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2AFXP16104 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2AFXP16104 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2AFXP16104 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
H2AFXP16104 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.88■■□□□ 1.09
H2AFXP16104 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
H2AFXP16104 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
H2AFXP16104 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
H2AFXP16104 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
H2AFXP16104 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
H2AFXP16104 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms