Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPRP12270 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TPRP12270 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPRP12270 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TPRP12270 RBM17P2-201ENST00000616397 1405 ntBASIC19.92■□□□□ 0.78
TPRP12270 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.92■□□□□ 0.78
TPRP12270 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPRP12270 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.92■□□□□ 0.78
TPRP12270 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.92■□□□□ 0.78
TPRP12270 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPRP12270 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.92■□□□□ 0.78
TPRP12270 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPRP12270 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.92■□□□□ 0.78
TPRP12270 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.92■□□□□ 0.78
TPRP12270 AL023875.1-201ENST00000640777 796 ntBASIC19.92■□□□□ 0.78
TPRP12270 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPRP12270 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPRP12270 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TPRP12270 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
TPRP12270 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.91■□□□□ 0.78
TPRP12270 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPRP12270 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.91■□□□□ 0.78
TPRP12270 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPRP12270 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPRP12270 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.91■□□□□ 0.78
TPRP12270 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPRP12270 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TPRP12270 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.91■□□□□ 0.78
TPRP12270 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
TPRP12270 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.91■□□□□ 0.78
TPRP12270 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TPRP12270 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.9■□□□□ 0.78
TPRP12270 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TPRP12270 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPRP12270 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPRP12270 AL450487.1-201ENST00000426799 995 ntBASIC19.9■□□□□ 0.78
TPRP12270 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPRP12270 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.9■□□□□ 0.78
TPRP12270 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.9■□□□□ 0.78
TPRP12270 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPRP12270 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPRP12270 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.9■□□□□ 0.78
TPRP12270 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPRP12270 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.9■□□□□ 0.78
TPRP12270 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPRP12270 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPRP12270 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TPRP12270 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.9■□□□□ 0.78
TPRP12270 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPRP12270 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPRP12270 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TPRP12270 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.89■□□□□ 0.78
TPRP12270 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPRP12270 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TPRP12270 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TPRP12270 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPRP12270 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.89■□□□□ 0.77
TPRP12270 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TPRP12270 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TPRP12270 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.89■□□□□ 0.77
TPRP12270 AC004263.2-201ENST00000617183 678 ntBASIC19.89■□□□□ 0.77
TPRP12270 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.89■□□□□ 0.77
TPRP12270 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.89■□□□□ 0.77
TPRP12270 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPRP12270 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPRP12270 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPRP12270 AC092368.3-202ENST00000574180 1591 ntBASIC19.88■□□□□ 0.77
TPRP12270 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPRP12270 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPRP12270 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPRP12270 TERF1P1-201ENST00000311003 1181 ntBASIC19.88■□□□□ 0.77
TPRP12270 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPRP12270 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPRP12270 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TPRP12270 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.87■□□□□ 0.77
TPRP12270 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPRP12270 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TPRP12270 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPRP12270 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.87■□□□□ 0.77
TPRP12270 AL031963.3-201ENST00000606441 850 ntBASIC19.87■□□□□ 0.77
TPRP12270 AC105020.6-201ENST00000621523 1217 ntBASIC19.87■□□□□ 0.77
TPRP12270 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.87■□□□□ 0.77
TPRP12270 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.87■□□□□ 0.77
TPRP12270 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPRP12270 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.87■□□□□ 0.77
TPRP12270 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.87■□□□□ 0.77
TPRP12270 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TPRP12270 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
TPRP12270 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPRP12270 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.87■□□□□ 0.77
TPRP12270 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPRP12270 AL121749.1-202ENST00000609313 2153 ntBASIC19.87■□□□□ 0.77
TPRP12270 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.87■□□□□ 0.77
TPRP12270 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TPRP12270 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPRP12270 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPRP12270 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TPRP12270 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
TPRP12270 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.86■□□□□ 0.77
TPRP12270 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms