Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLUP10909 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLUP10909 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CLUP10909 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.91■□□□□ 0.62
CLUP10909 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLUP10909 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLUP10909 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.91■□□□□ 0.62
CLUP10909 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLUP10909 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLUP10909 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLUP10909 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLUP10909 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLUP10909 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.91■□□□□ 0.62
CLUP10909 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.9■□□□□ 0.62
CLUP10909 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.9■□□□□ 0.62
CLUP10909 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.9■□□□□ 0.62
CLUP10909 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.9■□□□□ 0.62
CLUP10909 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 LINC01006-201ENST00000333319 2292 ntBASIC18.9■□□□□ 0.62
CLUP10909 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.9■□□□□ 0.62
CLUP10909 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLUP10909 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.62
CLUP10909 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
CLUP10909 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLUP10909 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CLUP10909 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.89■□□□□ 0.61
CLUP10909 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLUP10909 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLUP10909 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.89■□□□□ 0.61
CLUP10909 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.89■□□□□ 0.61
CLUP10909 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.89■□□□□ 0.61
CLUP10909 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLUP10909 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLUP10909 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLUP10909 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.89■□□□□ 0.61
CLUP10909 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLUP10909 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLUP10909 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.89■□□□□ 0.61
CLUP10909 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLUP10909 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.89■□□□□ 0.61
CLUP10909 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLUP10909 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLUP10909 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLUP10909 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLUP10909 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.88■□□□□ 0.61
CLUP10909 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.88■□□□□ 0.61
CLUP10909 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.88■□□□□ 0.61
CLUP10909 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.88■□□□□ 0.61
CLUP10909 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLUP10909 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLUP10909 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.88■□□□□ 0.61
CLUP10909 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLUP10909 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.88■□□□□ 0.61
CLUP10909 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLUP10909 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.88■□□□□ 0.61
CLUP10909 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLUP10909 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLUP10909 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLUP10909 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLUP10909 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLUP10909 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLUP10909 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.87■□□□□ 0.61
CLUP10909 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLUP10909 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLUP10909 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.87■□□□□ 0.61
CLUP10909 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLUP10909 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLUP10909 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLUP10909 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.87■□□□□ 0.61
CLUP10909 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.87■□□□□ 0.61
CLUP10909 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLUP10909 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.86■□□□□ 0.61
CLUP10909 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLUP10909 LINC01521-201ENST00000504184 1943 ntBASIC18.86■□□□□ 0.61
CLUP10909 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CLUP10909 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.86■□□□□ 0.61
CLUP10909 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.86■□□□□ 0.61
CLUP10909 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLUP10909 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLUP10909 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLUP10909 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLUP10909 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CLUP10909 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms