Protein–RNA interactions for Protein: P0C0S8

HIST1H2AG, Histone H2A type 1, humanhuman

Predicted RBP Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AGP0C0S8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2AGP0C0S8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2AGP0C0S8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2AGP0C0S8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2AGP0C0S8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.59■□□□□ 0.89
HIST1H2AGP0C0S8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2AGP0C0S8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HIST1H2AGP0C0S8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
HIST1H2AGP0C0S8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2AGP0C0S8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2AGP0C0S8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HIST1H2AGP0C0S8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.59■□□□□ 0.89
HIST1H2AGP0C0S8 AC079140.4-201ENST00000507448 529 ntBASIC20.59■□□□□ 0.89
HIST1H2AGP0C0S8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2AGP0C0S8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2AGP0C0S8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2AGP0C0S8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.59■□□□□ 0.89
HIST1H2AGP0C0S8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H2AGP0C0S8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H2AGP0C0S8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H2AGP0C0S8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.58■□□□□ 0.89
HIST1H2AGP0C0S8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H2AGP0C0S8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H2AGP0C0S8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H2AGP0C0S8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.58■□□□□ 0.89
HIST1H2AGP0C0S8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.58■□□□□ 0.89
HIST1H2AGP0C0S8 AL137060.1-201ENST00000618151 2648 ntBASIC20.58■□□□□ 0.89
HIST1H2AGP0C0S8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.58■□□□□ 0.88
HIST1H2AGP0C0S8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H2AGP0C0S8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H2AGP0C0S8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H2AGP0C0S8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H2AGP0C0S8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
HIST1H2AGP0C0S8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.58■□□□□ 0.88
HIST1H2AGP0C0S8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
HIST1H2AGP0C0S8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 FEM1AP4-201ENST00000443167 1987 ntBASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 ZNRF2P3-201ENST00000424200 374 ntBASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 AC123595.1-201ENST00000440769 1046 ntBASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H2AGP0C0S8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HIST1H2AGP0C0S8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H2AGP0C0S8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H2AGP0C0S8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HIST1H2AGP0C0S8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HIST1H2AGP0C0S8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H2AGP0C0S8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.56■□□□□ 0.88
HIST1H2AGP0C0S8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.56■□□□□ 0.88
HIST1H2AGP0C0S8 AC053503.5-201ENST00000601508 636 ntBASIC20.56■□□□□ 0.88
HIST1H2AGP0C0S8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H2AGP0C0S8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
HIST1H2AGP0C0S8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H2AGP0C0S8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 YBX1P1-201ENST00000445822 960 ntBASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H2AGP0C0S8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H2AGP0C0S8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H2AGP0C0S8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H2AGP0C0S8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H2AGP0C0S8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H2AGP0C0S8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.54■□□□□ 0.88
HIST1H2AGP0C0S8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HIST1H2AGP0C0S8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.54■□□□□ 0.88
HIST1H2AGP0C0S8 EEF1DP3-203ENST00000566025 782 ntBASIC20.54■□□□□ 0.88
HIST1H2AGP0C0S8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H2AGP0C0S8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.54■□□□□ 0.88
HIST1H2AGP0C0S8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HIST1H2AGP0C0S8 KRT87P-202ENST00000534226 1464 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms