Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP2P08253 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP2P08253 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP2P08253 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP2P08253 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP2P08253 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP2P08253 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP2P08253 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
MMP2P08253 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
MMP2P08253 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP2P08253 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.25■□□□□ 0.99
MMP2P08253 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.25■□□□□ 0.99
MMP2P08253 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP2P08253 AC005229.4-201ENST00000610085 2198 ntBASIC21.24■□□□□ 0.99
MMP2P08253 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
MMP2P08253 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP2P08253 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP2P08253 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP2P08253 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP2P08253 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP2P08253 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.24■□□□□ 0.99
MMP2P08253 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.24■□□□□ 0.99
MMP2P08253 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.24■□□□□ 0.99
MMP2P08253 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.24■□□□□ 0.99
MMP2P08253 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP2P08253 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP2P08253 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP2P08253 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP2P08253 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.24■□□□□ 0.99
MMP2P08253 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.24■□□□□ 0.99
MMP2P08253 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP2P08253 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
MMP2P08253 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.24■□□□□ 0.99
MMP2P08253 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
MMP2P08253 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.23■□□□□ 0.99
MMP2P08253 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.23■□□□□ 0.99
MMP2P08253 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.23■□□□□ 0.99
MMP2P08253 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MMP2P08253 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.23■□□□□ 0.99
MMP2P08253 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.23■□□□□ 0.99
MMP2P08253 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.23■□□□□ 0.99
MMP2P08253 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.23■□□□□ 0.99
MMP2P08253 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP2P08253 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.23■□□□□ 0.99
MMP2P08253 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP2P08253 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.23■□□□□ 0.99
MMP2P08253 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP2P08253 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.23■□□□□ 0.99
MMP2P08253 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP2P08253 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MMP2P08253 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.23■□□□□ 0.99
MMP2P08253 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP2P08253 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
MMP2P08253 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
MMP2P08253 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MMP2P08253 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP2P08253 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MMP2P08253 AL162430.1-201ENST00000480705 870 ntBASIC21.22■□□□□ 0.99
MMP2P08253 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.22■□□□□ 0.99
MMP2P08253 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.22■□□□□ 0.99
MMP2P08253 MIR5787-201ENST00000611784 55 ntBASIC21.22■□□□□ 0.99
MMP2P08253 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP2P08253 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
MMP2P08253 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
MMP2P08253 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MMP2P08253 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MMP2P08253 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MMP2P08253 KRT19P1-201ENST00000405746 1186 ntBASIC21.21■□□□□ 0.99
MMP2P08253 POU5F1P4-201ENST00000413175 1085 ntBASIC21.21■□□□□ 0.99
MMP2P08253 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.21■□□□□ 0.99
MMP2P08253 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MMP2P08253 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.21■□□□□ 0.99
MMP2P08253 SLC7A5P2-201ENST00000553010 536 ntBASIC21.21■□□□□ 0.99
MMP2P08253 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.21■□□□□ 0.99
MMP2P08253 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MMP2P08253 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MMP2P08253 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
MMP2P08253 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.21■□□□□ 0.99
MMP2P08253 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MMP2P08253 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP2P08253 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
MMP2P08253 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP2P08253 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP2P08253 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP2P08253 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP2P08253 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP2P08253 AC008175.2-201ENST00000612840 297 ntBASIC21.2■□□□□ 0.98
MMP2P08253 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP2P08253 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
MMP2P08253 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.19■□□□□ 0.98
MMP2P08253 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP2P08253 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.19■□□□□ 0.98
MMP2P08253 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP2P08253 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
MMP2P08253 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.19■□□□□ 0.98
MMP2P08253 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.19■□□□□ 0.98
MMP2P08253 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.19■□□□□ 0.98
MMP2P08253 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP2P08253 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP2P08253 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms