Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.24■□□□□ 0.99
RETP07949 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RETP07949 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RETP07949 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.24■□□□□ 0.99
RETP07949 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.24■□□□□ 0.99
RETP07949 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RETP07949 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RETP07949 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RETP07949 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RETP07949 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RETP07949 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.23■□□□□ 0.99
RETP07949 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RETP07949 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RETP07949 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RETP07949 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.23■□□□□ 0.99
RETP07949 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.23■□□□□ 0.99
RETP07949 AC091874.3-201ENST00000512672 1195 ntBASIC21.23■□□□□ 0.99
RETP07949 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.23■□□□□ 0.99
RETP07949 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RETP07949 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RETP07949 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RETP07949 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RETP07949 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.23■□□□□ 0.99
RETP07949 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RETP07949 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.23■□□□□ 0.99
RETP07949 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETP07949 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETP07949 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETP07949 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RETP07949 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.22■□□□□ 0.99
RETP07949 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RETP07949 UBE2SP1-201ENST00000450587 669 ntBASIC21.22■□□□□ 0.99
RETP07949 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.22■□□□□ 0.99
RETP07949 AC026366.1-201ENST00000488803 879 ntBASIC21.22■□□□□ 0.99
RETP07949 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.22■□□□□ 0.99
RETP07949 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.22■□□□□ 0.99
RETP07949 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.22■□□□□ 0.99
RETP07949 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.22■□□□□ 0.99
RETP07949 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.22■□□□□ 0.99
RETP07949 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETP07949 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETP07949 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETP07949 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETP07949 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETP07949 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETP07949 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RETP07949 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RETP07949 AL353803.4-201ENST00000565882 1934 ntBASIC21.21■□□□□ 0.99
RETP07949 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.21■□□□□ 0.99
RETP07949 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RETP07949 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RETP07949 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RETP07949 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RETP07949 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.21■□□□□ 0.99
RETP07949 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.21■□□□□ 0.99
RETP07949 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RETP07949 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.21■□□□□ 0.99
RETP07949 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RETP07949 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RETP07949 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.99
RETP07949 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RETP07949 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RETP07949 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.2■□□□□ 0.98
RETP07949 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.2■□□□□ 0.98
RETP07949 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RETP07949 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.2■□□□□ 0.98
RETP07949 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.2■□□□□ 0.98
RETP07949 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RETP07949 MIR1224-201ENST00000408193 85 ntBASIC21.2■□□□□ 0.98
RETP07949 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.2■□□□□ 0.98
RETP07949 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RETP07949 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RETP07949 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.2■□□□□ 0.98
RETP07949 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETP07949 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.19■□□□□ 0.98
RETP07949 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RETP07949 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RETP07949 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.19■□□□□ 0.98
RETP07949 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.19■□□□□ 0.98
RETP07949 AC073648.6-201ENST00000641589 218 ntBASIC21.19■□□□□ 0.98
RETP07949 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETP07949 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.19■□□□□ 0.98
RETP07949 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.19■□□□□ 0.98
RETP07949 AC137767.1-201ENST00000602918 1920 ntBASIC21.19■□□□□ 0.98
RETP07949 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETP07949 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.19■□□□□ 0.98
RETP07949 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RETP07949 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RETP07949 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
RETP07949 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.18■□□□□ 0.98
RETP07949 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RETP07949 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.18■□□□□ 0.98
RETP07949 UNC93B5-201ENST00000530315 699 ntBASIC21.18■□□□□ 0.98
RETP07949 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.18■□□□□ 0.98
RETP07949 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.18■□□□□ 0.98
RETP07949 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.18■□□□□ 0.98
RETP07949 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.18■□□□□ 0.98
RETP07949 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.18■□□□□ 0.98
RETP07949 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RETP07949 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms