Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGN1P05114 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HMGN1P05114 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.99■□□□□ 0.63
HMGN1P05114 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
HMGN1P05114 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HMGN1P05114 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGN1P05114 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGN1P05114 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGN1P05114 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
HMGN1P05114 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGN1P05114 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGN1P05114 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGN1P05114 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGN1P05114 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGN1P05114 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGN1P05114 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGN1P05114 GUSBP5-201ENST00000418136 578 ntBASIC18.99■□□□□ 0.63
HMGN1P05114 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
HMGN1P05114 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.99■□□□□ 0.63
HMGN1P05114 AC011298.3-201ENST00000615796 283 ntBASIC18.99■□□□□ 0.63
HMGN1P05114 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGN1P05114 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGN1P05114 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGN1P05114 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN1P05114 AC006128.1-201ENST00000624704 1661 ntBASIC18.98■□□□□ 0.63
HMGN1P05114 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN1P05114 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN1P05114 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGN1P05114 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGN1P05114 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.98■□□□□ 0.63
HMGN1P05114 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN1P05114 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
HMGN1P05114 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HMGN1P05114 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HMGN1P05114 AL035685.1-201ENST00000636663 812 ntBASIC18.98■□□□□ 0.63
HMGN1P05114 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN1P05114 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
HMGN1P05114 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN1P05114 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGN1P05114 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HMGN1P05114 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGN1P05114 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN1P05114 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGN1P05114 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGN1P05114 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN1P05114 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN1P05114 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGN1P05114 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN1P05114 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.97■□□□□ 0.63
HMGN1P05114 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HMGN1P05114 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN1P05114 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN1P05114 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGN1P05114 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN1P05114 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN1P05114 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGN1P05114 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
HMGN1P05114 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN1P05114 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
HMGN1P05114 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HMGN1P05114 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGN1P05114 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN1P05114 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN1P05114 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN1P05114 SLC47A1P1-202ENST00000449666 945 ntBASIC18.96■□□□□ 0.63
HMGN1P05114 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGN1P05114 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HMGN1P05114 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN1P05114 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGN1P05114 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGN1P05114 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN1P05114 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN1P05114 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
HMGN1P05114 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN1P05114 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN1P05114 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN1P05114 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN1P05114 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.95■□□□□ 0.62
HMGN1P05114 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN1P05114 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN1P05114 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN1P05114 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGN1P05114 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGN1P05114 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
HMGN1P05114 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN1P05114 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGN1P05114 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.95■□□□□ 0.62
HMGN1P05114 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGN1P05114 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN1P05114 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN1P05114 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.95■□□□□ 0.62
HMGN1P05114 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN1P05114 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGN1P05114 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN1P05114 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN1P05114 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGN1P05114 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN1P05114 GABARAPL3-202ENST00000624044 1851 ntBASIC18.94■□□□□ 0.62
HMGN1P05114 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGN1P05114 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms