Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUPT3HO75486 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUPT3HO75486 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.76■□□□□ 0.91
SUPT3HO75486 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SUPT3HO75486 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUPT3HO75486 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SUPT3HO75486 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUPT3HO75486 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUPT3HO75486 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUPT3HO75486 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.75■□□□□ 0.91
SUPT3HO75486 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUPT3HO75486 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUPT3HO75486 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
SUPT3HO75486 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUPT3HO75486 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SUPT3HO75486 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUPT3HO75486 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUPT3HO75486 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.75■□□□□ 0.91
SUPT3HO75486 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SUPT3HO75486 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SUPT3HO75486 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.74■□□□□ 0.91
SUPT3HO75486 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.74■□□□□ 0.91
SUPT3HO75486 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.74■□□□□ 0.91
SUPT3HO75486 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SUPT3HO75486 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.74■□□□□ 0.91
SUPT3HO75486 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SUPT3HO75486 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SUPT3HO75486 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.74■□□□□ 0.91
SUPT3HO75486 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SUPT3HO75486 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.74■□□□□ 0.91
SUPT3HO75486 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.74■□□□□ 0.91
SUPT3HO75486 AP001330.3-201ENST00000520123 633 ntBASIC20.74■□□□□ 0.91
SUPT3HO75486 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.74■□□□□ 0.91
SUPT3HO75486 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.74■□□□□ 0.91
SUPT3HO75486 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.74■□□□□ 0.91
SUPT3HO75486 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.74■□□□□ 0.91
SUPT3HO75486 AC105233.4-201ENST00000642045 216 ntBASIC20.74■□□□□ 0.91
SUPT3HO75486 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SUPT3HO75486 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.74■□□□□ 0.91
SUPT3HO75486 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SUPT3HO75486 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SUPT3HO75486 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SUPT3HO75486 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.73■□□□□ 0.91
SUPT3HO75486 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SUPT3HO75486 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SUPT3HO75486 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SUPT3HO75486 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SUPT3HO75486 EDA-201ENST00000338901 1233 ntBASIC20.73■□□□□ 0.91
SUPT3HO75486 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.73■□□□□ 0.91
SUPT3HO75486 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.73■□□□□ 0.91
SUPT3HO75486 AC110285.6-201ENST00000617652 491 ntBASIC20.73■□□□□ 0.91
SUPT3HO75486 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SUPT3HO75486 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SUPT3HO75486 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SUPT3HO75486 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SUPT3HO75486 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SUPT3HO75486 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SUPT3HO75486 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SUPT3HO75486 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
SUPT3HO75486 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
SUPT3HO75486 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SUPT3HO75486 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SUPT3HO75486 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.73■□□□□ 0.91
SUPT3HO75486 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
SUPT3HO75486 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SUPT3HO75486 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.72■□□□□ 0.91
SUPT3HO75486 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.72■□□□□ 0.91
SUPT3HO75486 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.72■□□□□ 0.91
SUPT3HO75486 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SUPT3HO75486 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SUPT3HO75486 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SUPT3HO75486 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SUPT3HO75486 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SUPT3HO75486 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.72■□□□□ 0.91
SUPT3HO75486 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SUPT3HO75486 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SUPT3HO75486 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SUPT3HO75486 AC073130.3-201ENST00000624389 2278 ntBASIC20.71■□□□□ 0.91
SUPT3HO75486 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.71■□□□□ 0.91
SUPT3HO75486 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SUPT3HO75486 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SUPT3HO75486 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SUPT3HO75486 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
SUPT3HO75486 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SUPT3HO75486 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.71■□□□□ 0.91
SUPT3HO75486 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.71■□□□□ 0.91
SUPT3HO75486 AF213884.3-201ENST00000563833 479 ntBASIC20.71■□□□□ 0.91
SUPT3HO75486 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.71■□□□□ 0.91
SUPT3HO75486 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SUPT3HO75486 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SUPT3HO75486 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SUPT3HO75486 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SUPT3HO75486 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SUPT3HO75486 AC009237.3-201ENST00000393279 1427 ntBASIC20.7■□□□□ 0.9
SUPT3HO75486 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SUPT3HO75486 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms