Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCNT1O60563 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCNT1O60563 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.93■■□□□ 1.42
CCNT1O60563 AC010141.2-201ENST00000452426 721 ntBASIC23.93■■□□□ 1.42
CCNT1O60563 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.93■■□□□ 1.42
CCNT1O60563 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CCNT1O60563 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CCNT1O60563 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCNT1O60563 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
CCNT1O60563 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCNT1O60563 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.92■■□□□ 1.42
CCNT1O60563 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCNT1O60563 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CCNT1O60563 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
CCNT1O60563 AC061975.6-201ENST00000579045 1553 ntBASIC23.92■■□□□ 1.42
CCNT1O60563 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCNT1O60563 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCNT1O60563 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCNT1O60563 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCNT1O60563 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNT1O60563 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCNT1O60563 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNT1O60563 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNT1O60563 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.91■■□□□ 1.42
CCNT1O60563 AC026310.3-201ENST00000625186 2373 ntBASIC23.91■■□□□ 1.42
CCNT1O60563 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNT1O60563 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNT1O60563 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNT1O60563 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNT1O60563 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.91■■□□□ 1.42
CCNT1O60563 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.91■■□□□ 1.42
CCNT1O60563 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.91■■□□□ 1.42
CCNT1O60563 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.91■■□□□ 1.42
CCNT1O60563 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.91■■□□□ 1.42
CCNT1O60563 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.91■■□□□ 1.42
CCNT1O60563 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.91■■□□□ 1.42
CCNT1O60563 AC008175.2-201ENST00000612840 297 ntBASIC23.91■■□□□ 1.42
CCNT1O60563 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNT1O60563 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNT1O60563 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCNT1O60563 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.91■■□□□ 1.42
CCNT1O60563 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCNT1O60563 AC007375.3-201ENST00000600936 2314 ntBASIC23.9■■□□□ 1.42
CCNT1O60563 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCNT1O60563 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCNT1O60563 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.9■■□□□ 1.42
CCNT1O60563 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCNT1O60563 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCNT1O60563 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.9■■□□□ 1.42
CCNT1O60563 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCNT1O60563 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
CCNT1O60563 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCNT1O60563 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CCNT1O60563 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCNT1O60563 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCNT1O60563 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCNT1O60563 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CCNT1O60563 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.89■■□□□ 1.41
CCNT1O60563 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.89■■□□□ 1.41
CCNT1O60563 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCNT1O60563 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCNT1O60563 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.89■■□□□ 1.41
CCNT1O60563 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.88■■□□□ 1.41
CCNT1O60563 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCNT1O60563 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
CCNT1O60563 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCNT1O60563 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCNT1O60563 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.88■■□□□ 1.41
CCNT1O60563 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCNT1O60563 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.88■■□□□ 1.41
CCNT1O60563 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.87■■□□□ 1.41
CCNT1O60563 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCNT1O60563 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CCNT1O60563 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCNT1O60563 POU5F1P4-201ENST00000413175 1085 ntBASIC23.87■■□□□ 1.41
CCNT1O60563 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
CCNT1O60563 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.87■■□□□ 1.41
CCNT1O60563 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.87■■□□□ 1.41
CCNT1O60563 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.87■■□□□ 1.41
CCNT1O60563 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCNT1O60563 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCNT1O60563 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.86■■□□□ 1.41
CCNT1O60563 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCNT1O60563 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCNT1O60563 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCNT1O60563 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.86■■□□□ 1.41
CCNT1O60563 SLC7A5P2-201ENST00000553010 536 ntBASIC23.86■■□□□ 1.41
CCNT1O60563 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.86■■□□□ 1.41
CCNT1O60563 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
CCNT1O60563 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.86■■□□□ 1.41
CCNT1O60563 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCNT1O60563 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.86■■□□□ 1.41
CCNT1O60563 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CCNT1O60563 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCNT1O60563 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CCNT1O60563 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.86■■□□□ 1.41
CCNT1O60563 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCNT1O60563 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.85■■□□□ 1.41
CCNT1O60563 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCNT1O60563 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms