Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PEX1O43933 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PEX1O43933 AC126544.1-201ENST00000580842 1059 ntBASIC20.36■□□□□ 0.85
PEX1O43933 AL499627.2-201ENST00000606283 725 ntBASIC20.36■□□□□ 0.85
PEX1O43933 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PEX1O43933 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PEX1O43933 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PEX1O43933 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PEX1O43933 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PEX1O43933 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PEX1O43933 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PEX1O43933 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PEX1O43933 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PEX1O43933 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PEX1O43933 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PEX1O43933 LINC01529-204ENST00000636474 1715 ntBASIC20.36■□□□□ 0.85
PEX1O43933 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.36■□□□□ 0.85
PEX1O43933 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.36■□□□□ 0.85
PEX1O43933 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.36■□□□□ 0.85
PEX1O43933 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PEX1O43933 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.35■□□□□ 0.85
PEX1O43933 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PEX1O43933 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PEX1O43933 IRS3P-201ENST00000223076 1006 ntBASIC20.35■□□□□ 0.85
PEX1O43933 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PEX1O43933 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.35■□□□□ 0.85
PEX1O43933 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.35■□□□□ 0.85
PEX1O43933 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PEX1O43933 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PEX1O43933 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PEX1O43933 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.35■□□□□ 0.85
PEX1O43933 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PEX1O43933 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PEX1O43933 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PEX1O43933 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.35■□□□□ 0.85
PEX1O43933 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PEX1O43933 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PEX1O43933 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PEX1O43933 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PEX1O43933 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PEX1O43933 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PEX1O43933 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PEX1O43933 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PEX1O43933 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PEX1O43933 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.34■□□□□ 0.85
PEX1O43933 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PEX1O43933 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.34■□□□□ 0.85
PEX1O43933 SLC47A1P1-202ENST00000449666 945 ntBASIC20.34■□□□□ 0.85
PEX1O43933 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.34■□□□□ 0.85
PEX1O43933 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.34■□□□□ 0.85
PEX1O43933 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PEX1O43933 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PEX1O43933 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.34■□□□□ 0.85
PEX1O43933 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PEX1O43933 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
PEX1O43933 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PEX1O43933 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEX1O43933 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEX1O43933 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEX1O43933 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEX1O43933 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEX1O43933 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEX1O43933 LINC01960-201ENST00000563759 1884 ntBASIC20.33■□□□□ 0.85
PEX1O43933 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.33■□□□□ 0.85
PEX1O43933 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
PEX1O43933 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PEX1O43933 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEX1O43933 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PEX1O43933 AC026271.2-201ENST00000428091 497 ntBASIC20.33■□□□□ 0.85
PEX1O43933 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.33■□□□□ 0.85
PEX1O43933 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.33■□□□□ 0.85
PEX1O43933 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEX1O43933 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PEX1O43933 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.33■□□□□ 0.84
PEX1O43933 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PEX1O43933 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.33■□□□□ 0.84
PEX1O43933 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PEX1O43933 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PEX1O43933 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX1O43933 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX1O43933 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX1O43933 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX1O43933 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.32■□□□□ 0.84
PEX1O43933 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PEX1O43933 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX1O43933 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PEX1O43933 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX1O43933 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX1O43933 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.32■□□□□ 0.84
PEX1O43933 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.32■□□□□ 0.84
PEX1O43933 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PEX1O43933 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX1O43933 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PEX1O43933 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX1O43933 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PEX1O43933 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PEX1O43933 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEX1O43933 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PEX1O43933 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PEX1O43933 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms