Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1AO00322 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UPK1AO00322 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1AO00322 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.93■□□□□ 0.78
UPK1AO00322 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1AO00322 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1AO00322 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1AO00322 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.93■□□□□ 0.78
UPK1AO00322 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
UPK1AO00322 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1AO00322 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1AO00322 FEM1AP1-201ENST00000431297 1995 ntBASIC19.93■□□□□ 0.78
UPK1AO00322 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1AO00322 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.93■□□□□ 0.78
UPK1AO00322 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1AO00322 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1AO00322 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
UPK1AO00322 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1AO00322 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1AO00322 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1AO00322 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.92■□□□□ 0.78
UPK1AO00322 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1AO00322 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1AO00322 BX005040.4-201ENST00000637145 1518 ntBASIC19.92■□□□□ 0.78
UPK1AO00322 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1AO00322 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1AO00322 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1AO00322 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.92■□□□□ 0.78
UPK1AO00322 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1AO00322 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.92■□□□□ 0.78
UPK1AO00322 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
UPK1AO00322 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1AO00322 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.92■□□□□ 0.78
UPK1AO00322 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.92■□□□□ 0.78
UPK1AO00322 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.92■□□□□ 0.78
UPK1AO00322 AC104564.3-201ENST00000582367 638 ntBASIC19.92■□□□□ 0.78
UPK1AO00322 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1AO00322 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
UPK1AO00322 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.92■□□□□ 0.78
UPK1AO00322 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1AO00322 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1AO00322 AC009237.3-201ENST00000393279 1427 ntBASIC19.92■□□□□ 0.78
UPK1AO00322 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1AO00322 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.92■□□□□ 0.78
UPK1AO00322 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.92■□□□□ 0.78
UPK1AO00322 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPK1AO00322 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK1AO00322 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK1AO00322 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPK1AO00322 AC105265.2-201ENST00000467189 838 ntBASIC19.91■□□□□ 0.78
UPK1AO00322 AC012414.1-201ENST00000556676 535 ntBASIC19.91■□□□□ 0.78
UPK1AO00322 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.91■□□□□ 0.78
UPK1AO00322 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK1AO00322 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UPK1AO00322 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UPK1AO00322 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
UPK1AO00322 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UPK1AO00322 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
UPK1AO00322 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.9■□□□□ 0.78
UPK1AO00322 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.9■□□□□ 0.78
UPK1AO00322 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.9■□□□□ 0.78
UPK1AO00322 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPK1AO00322 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.9■□□□□ 0.78
UPK1AO00322 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.9■□□□□ 0.78
UPK1AO00322 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.78
UPK1AO00322 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.78
UPK1AO00322 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPK1AO00322 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPK1AO00322 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPK1AO00322 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPK1AO00322 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPK1AO00322 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.89■□□□□ 0.77
UPK1AO00322 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.89■□□□□ 0.77
UPK1AO00322 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
UPK1AO00322 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPK1AO00322 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
UPK1AO00322 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.89■□□□□ 0.77
UPK1AO00322 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
UPK1AO00322 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK1AO00322 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK1AO00322 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
UPK1AO00322 AC055733.4-201ENST00000638462 1354 ntBASIC19.88■□□□□ 0.77
UPK1AO00322 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.88■□□□□ 0.77
UPK1AO00322 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.88■□□□□ 0.77
UPK1AO00322 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.88■□□□□ 0.77
UPK1AO00322 AL354811.1-201ENST00000610286 706 ntBASIC19.88■□□□□ 0.77
UPK1AO00322 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK1AO00322 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.88■□□□□ 0.77
UPK1AO00322 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UPK1AO00322 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
UPK1AO00322 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
UPK1AO00322 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UPK1AO00322 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
UPK1AO00322 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK1AO00322 AC005224.4-201ENST00000583262 1652 ntBASIC19.87■□□□□ 0.77
UPK1AO00322 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1AO00322 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
UPK1AO00322 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1AO00322 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.87■□□□□ 0.77
UPK1AO00322 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms