Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00473A8K010 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC00473A8K010 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00473A8K010 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00473A8K010 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC00473A8K010 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00473A8K010 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00473A8K010 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC00473A8K010 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00473A8K010 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00473A8K010 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00473A8K010 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00473A8K010 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC00473A8K010 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00473A8K010 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00473A8K010 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00473A8K010 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00473A8K010 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00473A8K010 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC00473A8K010 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.11■□□□□ 0.33
LINC00473A8K010 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
LINC00473A8K010 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.11■□□□□ 0.33
LINC00473A8K010 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.11■□□□□ 0.33
LINC00473A8K010 AC106739.1-201ENST00000617035 715 ntBASIC17.11■□□□□ 0.33
LINC00473A8K010 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00473A8K010 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC00473A8K010 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00473A8K010 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00473A8K010 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LINC00473A8K010 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00473A8K010 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC00473A8K010 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00473A8K010 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00473A8K010 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC00473A8K010 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00473A8K010 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00473A8K010 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LINC00473A8K010 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00473A8K010 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00473A8K010 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LINC00473A8K010 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.1■□□□□ 0.33
LINC00473A8K010 AP001330.3-201ENST00000520123 633 ntBASIC17.1■□□□□ 0.33
LINC00473A8K010 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC00473A8K010 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.1■□□□□ 0.33
LINC00473A8K010 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC00473A8K010 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC00473A8K010 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00473A8K010 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00473A8K010 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00473A8K010 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC00473A8K010 AC005224.4-201ENST00000583262 1652 ntBASIC17.1■□□□□ 0.33
LINC00473A8K010 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00473A8K010 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00473A8K010 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00473A8K010 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00473A8K010 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LINC00473A8K010 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00473A8K010 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.09■□□□□ 0.33
LINC00473A8K010 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LINC00473A8K010 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC00473A8K010 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00473A8K010 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC00473A8K010 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00473A8K010 LINC01006-201ENST00000333319 2292 ntBASIC17.09■□□□□ 0.33
LINC00473A8K010 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00473A8K010 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00473A8K010 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00473A8K010 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
LINC00473A8K010 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.08■□□□□ 0.33
LINC00473A8K010 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.08■□□□□ 0.33
LINC00473A8K010 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LINC00473A8K010 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.08■□□□□ 0.33
LINC00473A8K010 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LINC00473A8K010 LINC01521-201ENST00000504184 1943 ntBASIC17.08■□□□□ 0.33
LINC00473A8K010 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
LINC00473A8K010 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00473A8K010 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LINC00473A8K010 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LINC00473A8K010 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LINC00473A8K010 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00473A8K010 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00473A8K010 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC00473A8K010 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC00473A8K010 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LINC00473A8K010 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
LINC00473A8K010 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00473A8K010 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00473A8K010 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00473A8K010 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00473A8K010 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.08■□□□□ 0.32
LINC00473A8K010 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00473A8K010 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00473A8K010 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00473A8K010 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00473A8K010 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00473A8K010 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.07■□□□□ 0.32
LINC00473A8K010 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00473A8K010 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00473A8K010 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00473A8K010 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms