Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM4A7MD48 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.92■□□□□ 0.3
SRRM4A7MD48 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM4A7MD48 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM4A7MD48 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SRRM4A7MD48 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.92■□□□□ 0.3
SRRM4A7MD48 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.92■□□□□ 0.3
SRRM4A7MD48 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.92■□□□□ 0.3
SRRM4A7MD48 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM4A7MD48 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.92■□□□□ 0.3
SRRM4A7MD48 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.92■□□□□ 0.3
SRRM4A7MD48 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.92■□□□□ 0.3
SRRM4A7MD48 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM4A7MD48 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM4A7MD48 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM4A7MD48 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM4A7MD48 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM4A7MD48 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.92■□□□□ 0.3
SRRM4A7MD48 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.92■□□□□ 0.3
SRRM4A7MD48 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM4A7MD48 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM4A7MD48 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM4A7MD48 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM4A7MD48 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRRM4A7MD48 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM4A7MD48 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.91■□□□□ 0.3
SRRM4A7MD48 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.91■□□□□ 0.3
SRRM4A7MD48 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM4A7MD48 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM4A7MD48 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM4A7MD48 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM4A7MD48 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM4A7MD48 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM4A7MD48 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM4A7MD48 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM4A7MD48 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.91■□□□□ 0.3
SRRM4A7MD48 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM4A7MD48 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM4A7MD48 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRRM4A7MD48 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.91■□□□□ 0.3
SRRM4A7MD48 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM4A7MD48 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.9■□□□□ 0.3
SRRM4A7MD48 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM4A7MD48 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM4A7MD48 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.9■□□□□ 0.3
SRRM4A7MD48 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM4A7MD48 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SRRM4A7MD48 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM4A7MD48 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM4A7MD48 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.9■□□□□ 0.3
SRRM4A7MD48 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM4A7MD48 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.9■□□□□ 0.3
SRRM4A7MD48 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.9■□□□□ 0.3
SRRM4A7MD48 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.9■□□□□ 0.3
SRRM4A7MD48 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.9■□□□□ 0.3
SRRM4A7MD48 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.9■□□□□ 0.3
SRRM4A7MD48 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.9■□□□□ 0.3
SRRM4A7MD48 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.9■□□□□ 0.3
SRRM4A7MD48 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM4A7MD48 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM4A7MD48 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM4A7MD48 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.9■□□□□ 0.3
SRRM4A7MD48 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM4A7MD48 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.9■□□□□ 0.3
SRRM4A7MD48 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM4A7MD48 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM4A7MD48 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM4A7MD48 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SRRM4A7MD48 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.89■□□□□ 0.29
SRRM4A7MD48 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM4A7MD48 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM4A7MD48 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SRRM4A7MD48 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM4A7MD48 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM4A7MD48 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.89■□□□□ 0.29
SRRM4A7MD48 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM4A7MD48 TPRG1LP1-201ENST00000598702 760 ntBASIC16.89■□□□□ 0.29
SRRM4A7MD48 AL354811.1-201ENST00000610286 706 ntBASIC16.89■□□□□ 0.29
SRRM4A7MD48 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.89■□□□□ 0.29
SRRM4A7MD48 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.89■□□□□ 0.29
SRRM4A7MD48 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM4A7MD48 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM4A7MD48 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.89■□□□□ 0.29
SRRM4A7MD48 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.89■□□□□ 0.29
SRRM4A7MD48 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM4A7MD48 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.88■□□□□ 0.29
SRRM4A7MD48 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM4A7MD48 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM4A7MD48 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM4A7MD48 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SRRM4A7MD48 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM4A7MD48 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM4A7MD48 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SRRM4A7MD48 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM4A7MD48 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.88■□□□□ 0.29
SRRM4A7MD48 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM4A7MD48 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.88■□□□□ 0.29
SRRM4A7MD48 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.88■□□□□ 0.29
SRRM4A7MD48 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.88■□□□□ 0.29
SRRM4A7MD48 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms