Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMX3A6NHT5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMX3A6NHT5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HMX3A6NHT5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMX3A6NHT5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMX3A6NHT5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMX3A6NHT5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HMX3A6NHT5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMX3A6NHT5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMX3A6NHT5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMX3A6NHT5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
HMX3A6NHT5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.19■□□□□ 0.5
HMX3A6NHT5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.19■□□□□ 0.5
HMX3A6NHT5 KRT8P33-201ENST00000508125 1423 ntBASIC18.19■□□□□ 0.5
HMX3A6NHT5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HMX3A6NHT5 THA1P-201ENST00000590384 1145 ntBASIC18.19■□□□□ 0.5
HMX3A6NHT5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMX3A6NHT5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMX3A6NHT5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HMX3A6NHT5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMX3A6NHT5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMX3A6NHT5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.18■□□□□ 0.5
HMX3A6NHT5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.18■□□□□ 0.5
HMX3A6NHT5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.18■□□□□ 0.5
HMX3A6NHT5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HMX3A6NHT5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMX3A6NHT5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMX3A6NHT5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMX3A6NHT5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMX3A6NHT5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMX3A6NHT5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HMX3A6NHT5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMX3A6NHT5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMX3A6NHT5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMX3A6NHT5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMX3A6NHT5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HMX3A6NHT5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HMX3A6NHT5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.18■□□□□ 0.5
HMX3A6NHT5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMX3A6NHT5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.18■□□□□ 0.5
HMX3A6NHT5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMX3A6NHT5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.18■□□□□ 0.5
HMX3A6NHT5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMX3A6NHT5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMX3A6NHT5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMX3A6NHT5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMX3A6NHT5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.17■□□□□ 0.5
HMX3A6NHT5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMX3A6NHT5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMX3A6NHT5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
HMX3A6NHT5 KRT18P24-201ENST00000344739 1156 ntBASIC18.17■□□□□ 0.5
HMX3A6NHT5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMX3A6NHT5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.17■□□□□ 0.5
HMX3A6NHT5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMX3A6NHT5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMX3A6NHT5 LINC01960-201ENST00000563759 1884 ntBASIC18.17■□□□□ 0.5
HMX3A6NHT5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.17■□□□□ 0.5
HMX3A6NHT5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMX3A6NHT5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HMX3A6NHT5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMX3A6NHT5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
HMX3A6NHT5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HMX3A6NHT5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HMX3A6NHT5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.16■□□□□ 0.5
HMX3A6NHT5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HMX3A6NHT5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMX3A6NHT5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMX3A6NHT5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMX3A6NHT5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMX3A6NHT5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HMX3A6NHT5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMX3A6NHT5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.16■□□□□ 0.5
HMX3A6NHT5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.16■□□□□ 0.5
HMX3A6NHT5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.16■□□□□ 0.5
HMX3A6NHT5 AC131274.2-201ENST00000580697 1507 ntBASIC18.16■□□□□ 0.5
HMX3A6NHT5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMX3A6NHT5 TNXA-203ENST00000507684 2038 ntBASIC18.16■□□□□ 0.5
HMX3A6NHT5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HMX3A6NHT5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMX3A6NHT5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.16■□□□□ 0.5
HMX3A6NHT5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.16■□□□□ 0.5
HMX3A6NHT5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HMX3A6NHT5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HMX3A6NHT5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.15■□□□□ 0.5
HMX3A6NHT5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.15■□□□□ 0.5
HMX3A6NHT5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
HMX3A6NHT5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.15■□□□□ 0.5
HMX3A6NHT5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMX3A6NHT5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMX3A6NHT5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HMX3A6NHT5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.15■□□□□ 0.5
HMX3A6NHT5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMX3A6NHT5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMX3A6NHT5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMX3A6NHT5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.15■□□□□ 0.5
HMX3A6NHT5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.15■□□□□ 0.5
HMX3A6NHT5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMX3A6NHT5 MIR4281-201ENST00000580852 62 ntBASIC18.15■□□□□ 0.5
HMX3A6NHT5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMX3A6NHT5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms