Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.2■□□□□ 0.66
ZC3H12DA2A288 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H12DA2A288 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H12DA2A288 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZC3H12DA2A288 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZC3H12DA2A288 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.18■□□□□ 0.66
ZC3H12DA2A288 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.18■□□□□ 0.66
ZC3H12DA2A288 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZC3H12DA2A288 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.18■□□□□ 0.66
ZC3H12DA2A288 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZC3H12DA2A288 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.18■□□□□ 0.66
ZC3H12DA2A288 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.18■□□□□ 0.66
ZC3H12DA2A288 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ZC3H12DA2A288 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZC3H12DA2A288 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ZC3H12DA2A288 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZC3H12DA2A288 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.17■□□□□ 0.66
ZC3H12DA2A288 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ZC3H12DA2A288 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZC3H12DA2A288 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZC3H12DA2A288 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.17■□□□□ 0.66
ZC3H12DA2A288 AC027612.3-201ENST00000413684 1047 ntBASIC19.17■□□□□ 0.66
ZC3H12DA2A288 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.17■□□□□ 0.66
ZC3H12DA2A288 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.17■□□□□ 0.66
ZC3H12DA2A288 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.17■□□□□ 0.66
ZC3H12DA2A288 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZC3H12DA2A288 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ZC3H12DA2A288 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZC3H12DA2A288 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZC3H12DA2A288 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H12DA2A288 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ZC3H12DA2A288 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZC3H12DA2A288 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H12DA2A288 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms