Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 AC133561.4-201ENST00000566112 224 ntBASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 TSPY26P-201ENST00000476365 1326 ntBASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 AC027682.1-201ENST00000562846 899 ntBASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 AC106739.1-201ENST00000617035 715 ntBASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-3A0A0B4J271 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV12-3A0A0B4J271 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.58■□□□□ 0.09
TRAV12-3A0A0B4J271 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV12-3A0A0B4J271 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-3A0A0B4J271 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 AC105233.4-201ENST00000642045 216 ntBASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-3A0A0B4J271 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms