Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AC073648.6-201ENST00000641589 218 ntBASIC22.21■■□□□ 1.15
HCFC2Q9Y5Z7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
HCFC2Q9Y5Z7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
HCFC2Q9Y5Z7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.21■■□□□ 1.15
HCFC2Q9Y5Z7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
HCFC2Q9Y5Z7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.15
HCFC2Q9Y5Z7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HCFC2Q9Y5Z7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HCFC2Q9Y5Z7 UNC93B4-201ENST00000505679 747 ntBASIC22.2■■□□□ 1.14
HCFC2Q9Y5Z7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.2■■□□□ 1.14
HCFC2Q9Y5Z7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.2■■□□□ 1.14
HCFC2Q9Y5Z7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.2■■□□□ 1.14
HCFC2Q9Y5Z7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.2■■□□□ 1.14
HCFC2Q9Y5Z7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HCFC2Q9Y5Z7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
HCFC2Q9Y5Z7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HCFC2Q9Y5Z7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HCFC2Q9Y5Z7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HCFC2Q9Y5Z7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.19■■□□□ 1.14
HCFC2Q9Y5Z7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.19■■□□□ 1.14
HCFC2Q9Y5Z7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
HCFC2Q9Y5Z7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HCFC2Q9Y5Z7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HCFC2Q9Y5Z7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
HCFC2Q9Y5Z7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 AC139530.1-201ENST00000575312 1977 ntBASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HCFC2Q9Y5Z7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
HCFC2Q9Y5Z7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HCFC2Q9Y5Z7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
HCFC2Q9Y5Z7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.17■■□□□ 1.14
HCFC2Q9Y5Z7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HCFC2Q9Y5Z7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.17■■□□□ 1.14
HCFC2Q9Y5Z7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HCFC2Q9Y5Z7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HCFC2Q9Y5Z7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HCFC2Q9Y5Z7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HCFC2Q9Y5Z7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
HCFC2Q9Y5Z7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.17■■□□□ 1.14
HCFC2Q9Y5Z7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 KRT17P1-201ENST00000399211 1546 ntBASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.16■■□□□ 1.14
HCFC2Q9Y5Z7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 AL355472.2-201ENST00000422958 438 ntBASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC2Q9Y5Z7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HCFC2Q9Y5Z7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HCFC2Q9Y5Z7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
HCFC2Q9Y5Z7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms